RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 TTYH2Q9BSA4 534 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 PCDH9Q9HC56 1237 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ABCB6Q9NP58 842 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 PCDHGC3Q9UN70 934 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 NPIPA1Q9UND3 350 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZMYM2Q9UBW7 1377 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 CAPN14A8MX76 684 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 EEF2KO00418 725 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 B4GAT1O43505 415 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 LPXNO60711 386 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 METTL18O95568 372 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 IFNA1P01562 189 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 LAG3P18627 525 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 AP3M2P53677 418 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 FADDQ13158 208 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 NFE2Q16621 373 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 EIPR1Q53HC9 387 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ATG9AQ7Z3C6 839 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 TMC4Q7Z404 712 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ALDH16A1Q8IZ83 802 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 HASPINQ8TF76 798 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 FIG4Q92562 907 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 REXO5Q96IC2 774 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 DSCC1Q9BVC3 393 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 MUC13Q9H3R2 512 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 SCPEP1Q9HB40 452 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 SPON1Q9HCB6 807 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 CMTM6Q9NX76 183 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 NIP7Q9Y221 180 aaKnown RBP eCLIP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 EMILIN1Q9Y6C2 1016 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 RALGAPBQ86X10 1494 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC22A1O15245 554 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 PRH1P02810 166 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 PLEKP08567 350 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 C6P13671 934 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 CES1P23141 567 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ARL4CP56559 192 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 RP1P56715 2156 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 TBX4P57082 545 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 USP10Q14694 798 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 TIGD6Q17RP2 521 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 SPDYCQ5MJ68 293 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 RBM44Q6ZP01 1051 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 TMEM26Q6ZUK4 368 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 MFSD6LQ8IWD5 586 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 FOXN4Q96NZ1 517 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 FUNDC2Q9BWH2 189 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ANKZF1Q9H8Y5 726 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 TMEM248Q9NWD8 314 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 PKP3Q9Y446 797 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 DLG5Q8TDM6 1919 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 CPED1A4D0V7 1026 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 M0R2Z0 102 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 FAM189A1O60320 539 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 LRP8Q14114 963 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 AGKQ53H12 422 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 STXBP5Q5T5C0 1151 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 REC114Q7Z4M0 266 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 CD163Q86VB7 1156 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ERO1BQ86YB8 467 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF547Q8IVP9 402 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 C12orf45Q8N5I9 185 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF366Q8N895 744 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF781Q8N8C0 355 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 MAB21L3Q8N8X9 362 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ACBD6Q9BR61 282 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZCCHC2Q9C0B9 1178 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 MTG2Q9H4K7 406 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 LIN7CQ9NUP9 197 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 SIDT1Q9NXL6 827 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 DBR1Q9UK59 544 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 WDR17Q8IZU2 1322 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 PRAMEF33A0A0G2JMD5 474 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC17A3O00476 420 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 PRAMEF10O60809 474 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ATP1A1P05023 1023 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 LYNP07948 512 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ETFAP13804 333 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 MPIP34949 423 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 HALP42357 657 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 NAA30Q147X3 362 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 LRRC57Q8N9N7 239 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 GGHQ92820 318 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 QRFPRQ96P65 431 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 NPAS2Q99743 824 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 NPLQ9BXD5 320 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 AKT3Q9Y243 479 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ASB4Q9Y574 426 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 PCDHGA4Q9Y5G9 962 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 HMX3A6NHT5 357 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 POC1B-GALNT4F8VUJ3 575 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC9A3R1O14745 358 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 PLOD3O60568 738 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 MAFKO60675 156 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 UQCRFS1P1P0C7P4 283 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 FRG1Q14331 258 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 MOB2Q70IA6 237 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 COMMD2Q86X83 199 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 TMPRSS6Q8IU80 811 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF420Q8TAQ5 688 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms