RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 GPER1Q99527 375 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 MAF1Q9H063 256 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 RAB23Q9ULC3 237 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 FMN2Q9NZ56 1722 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 XDHP47989 1333 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 PEX2P28328 305 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 POLD2P49005 469 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 ACOT2P49753 483 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 CSHL1Q14406 222 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 CDCA2Q69YH5 1023 aaPredicted RBP10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 BRSK2Q8IWQ3 736 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 ETNPPLQ8TBG4 499 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 NLNQ9BYT8 704 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 CYTH4Q9UIA0 394 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 KIF1AQ12756 1690 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 SLC30A4O14863 429 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 PRKAB2O43741 272 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 PCCAP05165 728 aaPredicted RBP10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 MNDAP41218 407 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 USP17L6PQ6QN14 398 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 ATG9AQ7Z3C6 839 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 C8orf48Q96LL4 319 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 CHIAQ9BZP6 476 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 GREM2Q9H772 168 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 ARID1AO14497 2285 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 SEC16AO15027 2179 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 CCDC85CA6NKD9 419 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 CASKO14936 926 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 TIPRLO75663 272 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 DBIP07108 87 aaKnown RBP10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 RPL4P36578 427 aaKnown RBP10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 CDK8P49336 464 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 CAV3P56539 151 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 RPL6Q02878 288 aaKnown RBP10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 PKN1Q16512 942 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 PIWIL4Q7Z3Z4 852 aaKnown RBP10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 GJD3Q8N144 294 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 FBXL16Q8N461 479 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 CDADC1Q9BWV3 514 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 STARD7Q9NQZ5 370 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 NUP153P49790 1475 aaKnown RBP10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 A0A0J9YVX5 310 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 IRF6O14896 467 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 HTR2AP28223 471 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 CRATP43155 626 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 GRM4Q14833 912 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 DSELQ8IZU8 1212 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 NSUN6Q8TEA1 469 aaKnown RBP10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 LGALS13Q9UHV8 139 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 SAMD4AQ9UPU9 718 aaKnown RBP10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 LRRC10BA6NIK2 292 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 FOXN1O15353 648 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 TBX1O43435 398 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 UBA1P22314 1058 aaKnown RBP10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 CD40LGP29965 261 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 LCN1P31025 176 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 ARFIP1P53367 373 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 WDR49Q8IV35 697 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 SEPT12Q8IYM1 358 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 ATAD1Q8NBU5 361 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 RBM15BQ8NDT2 890 aaKnown RBP10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 GSTCDQ8NEC7 633 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 PTCD2Q8WV60 388 aaKnown RBP10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 MMP27Q9H306 513 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 EXO5Q9H790 373 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 NINJ2Q9NZG7 142 aa10.36□□□□□ -0.75
SPTBN1-201ENST00000333896 A8MUI8 341 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 H0YJX3 145 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 RSL1D1O76021 490 aaKnown RBP10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 CST1P01037 141 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 KLK7P49862 253 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 SLC25A3Q00325 362 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 BORAQ6PGQ7 559 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 OFCC1Q8IZS5 231 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 SETD6Q8TBK2 473 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 LRRC19Q9H756 370 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 FAM86C1Q9NVL1 165 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 DICER1Q9UPY3 1922 aaKnown RBP10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 INSCQ1MX18 579 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 MGAT5BQ3V5L5 792 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 PCID2Q5JVF3 399 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 ZZZ3Q8IYH5 903 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 FBXO30Q8TB52 745 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 DNAJA4Q8WW22 397 aaPredicted RBP10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 SLC30A2Q9BRI3 323 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 TRIM36Q9NQ86 728 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 NCKAP1Q9Y2A7 1128 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 IFT52Q9Y366 437 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 M0R233 179 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 HDAC3O15379 428 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 C8BP07358 591 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 AFF1P51825 1210 aaKnown RBP10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 DEFA6Q01524 100 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 LIPMQ5VYY2 423 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 CCDC71Q8IV32 467 aaPredicted RBP10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 CRELD1Q96HD1 420 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 GRIN2DO15399 1336 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 C1orf196B1AJZ1 125 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 USP17L15C9J2P7 530 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 USP17L13C9JLJ4 530 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms