RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 CLSTN3Q9BQT9 956 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 CYP4F11Q9HBI6 524 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 CYP4F12Q9HCS2 524 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 ARHGAP26Q9UNA1 814 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 CCDC162PA2VCL2 907 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 TMEM233B4DJY2 109 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 CD3EAPO15446 510 aaKnown RBP17.45■□□□□ 0.38
DDX28-201ENST00000332395 KDELR3O43731 214 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 RGRP47804 291 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 SGSHP51688 502 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 ATN1P54259 1190 aaPredicted RBP17.45■□□□□ 0.38
DDX28-201ENST00000332395 SH2D4BQ5SQS7 431 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 FAM45BPQ6NSW5 357 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 TMEM207Q6UWW9 146 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 PIM3Q86V86 326 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 APLFQ8IW19 511 aaPredicted RBP17.45■□□□□ 0.38
DDX28-201ENST00000332395 GPR150Q8NGU9 434 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 FAM45AQ8TCE6 357 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 NRG4Q8WWG1 115 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 DEFB118Q96PH6 123 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 RTKNQ9BST9 563 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 CCDC28BQ9BUN5 200 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 CWH43Q9H720 699 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 GKN1Q9NS71 199 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 TRPM5Q9NZQ8 1165 aa17.45■□□□□ 0.38
DDX28-201ENST00000332395 MICAL3Q7RTP6 2002 aa17.44■□□□□ 0.38
DDX28-201ENST00000332395 CCNT2O60583 730 aaKnown RBP17.44■□□□□ 0.38
DDX28-201ENST00000332395 HNRNPLP14866 589 aaKnown RBP eCLIP17.44■□□□□ 0.38
DDX28-201ENST00000332395 PIK3R1P27986 724 aa17.44■□□□□ 0.38
DDX28-201ENST00000332395 SLC26A3P40879 764 aa17.44■□□□□ 0.38
DDX28-201ENST00000332395 BTKQ06187 659 aa17.44■□□□□ 0.38
DDX28-201ENST00000332395 GPR158Q5T848 1215 aa17.44■□□□□ 0.38
DDX28-201ENST00000332395 MRNIPQ6NTE8 343 aa17.44■□□□□ 0.38
DDX28-201ENST00000332395 MYLK4Q86YV6 388 aaPredicted RBP17.44■□□□□ 0.38
DDX28-201ENST00000332395 DEFB107AQ8IZN7 70 aa17.44■□□□□ 0.38
DDX28-201ENST00000332395 ZNF461Q8TAF7 563 aa17.44■□□□□ 0.38
DDX28-201ENST00000332395 EXOC2Q96KP1 924 aa17.44■□□□□ 0.38
DDX28-201ENST00000332395 NMRK1Q9NWW6 199 aa17.44■□□□□ 0.38
DDX28-201ENST00000332395 GTSE1Q9NYZ3 720 aa17.44■□□□□ 0.38
DDX28-201ENST00000332395 CDH22Q9UJ99 828 aa17.44■□□□□ 0.38
DDX28-201ENST00000332395 RIMKLBQ9ULI2 386 aa17.44■□□□□ 0.38
DDX28-201ENST00000332395 TRIM17Q9Y577 477 aa17.44■□□□□ 0.38
DDX28-201ENST00000332395 WASF2Q9Y6W5 498 aa17.44■□□□□ 0.38
DDX28-201ENST00000332395 ILVBLA1L0T0 632 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 EIF4E1BA6NMX2 242 aaKnown RBP17.43■□□□□ 0.38
DDX28-201ENST00000332395 RHOCP08134 193 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 ACADSP16219 412 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 PPARGP37231 505 aaPredicted RBP17.43■□□□□ 0.38
DDX28-201ENST00000332395 ERFP50548 548 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 SCNN1BP51168 640 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 PLK1P53350 603 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 EPHB1P54762 984 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 SEMA3AQ14563 771 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 AP1ARQ63HQ0 302 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 NXNQ6DKJ4 435 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 ZNF549Q6P9A3 640 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 PGM2L1Q6PCE3 622 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 LRRC74BQ6ZQY2 392 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 OR4L1Q8NH43 312 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 SH3RF2Q8TEC5 729 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 MYRFLQ96LU7 910 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 NSMCE3Q96MG7 304 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 ZNF385DQ9H6B1 395 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 CATSPERZQ9NTU4 200 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 G3BP2Q9UN86 482 aaKnown RBP17.43■□□□□ 0.38
DDX28-201ENST00000332395 MTF2Q9Y483 593 aaPredicted RBP17.43■□□□□ 0.38
DDX28-201ENST00000332395 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.43■□□□□ 0.38
DDX28-201ENST00000332395 NVLO15381 856 aaKnown RBP17.43■□□□□ 0.38
DDX28-201ENST00000332395 ABLIM3O94929 683 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 SLC4A1P02730 911 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 THRAP10827 490 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 IRF1P10914 325 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 CD1EP15812 388 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 FDXRP22570 491 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 ILF2Q12905 390 aaKnown RBP17.43■□□□□ 0.38
DDX28-201ENST00000332395 ZNF177Q13360 481 aaPredicted RBP17.43■□□□□ 0.38
DDX28-201ENST00000332395 MUM1Q2TAK8 710 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 TMEM198Q66K66 360 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 CHST9Q7L1S5 443 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 CPSF7Q8N684 471 aaKnown RBP17.43■□□□□ 0.38
DDX28-201ENST00000332395 RNF38Q9H0F5 515 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 ALG9Q9H6U8 611 aa17.43■□□□□ 0.38
DDX28-201ENST00000332395 PAK6Q9NQU5 681 aaPredicted RBP17.43■□□□□ 0.38
DDX28-201ENST00000332395 A0A1B0GVM2 712 aa17.42■□□□□ 0.38
DDX28-201ENST00000332395 ANKRD33BA6NCL7 494 aa17.42■□□□□ 0.38
DDX28-201ENST00000332395 TCAF2A6NFQ2 919 aa17.42■□□□□ 0.38
DDX28-201ENST00000332395 TRPC5OSA6NMA1 111 aa17.42■□□□□ 0.38
DDX28-201ENST00000332395 SLC22A2O15244 555 aa17.42■□□□□ 0.38
DDX28-201ENST00000332395 INSIG1O15503 277 aa17.42■□□□□ 0.38
DDX28-201ENST00000332395 PDE5AO76074 875 aa17.42■□□□□ 0.38
DDX28-201ENST00000332395 CR2P20023 1033 aa17.42■□□□□ 0.38
DDX28-201ENST00000332395 OGNP20774 298 aaKnown RBP17.42■□□□□ 0.38
DDX28-201ENST00000332395 SULT2A1Q06520 285 aa17.42■□□□□ 0.38
DDX28-201ENST00000332395 PLD1Q13393 1074 aa17.42■□□□□ 0.38
DDX28-201ENST00000332395 RFTN1Q14699 578 aaPredicted RBP17.42■□□□□ 0.38
DDX28-201ENST00000332395 TAF12Q16514 161 aa17.42■□□□□ 0.38
DDX28-201ENST00000332395 ADGRF1Q5T601 910 aa17.42■□□□□ 0.38
DDX28-201ENST00000332395 THEMIS2Q5TEJ8 643 aa17.42■□□□□ 0.38
DDX28-201ENST00000332395 ISCA2Q86U28 154 aa17.42■□□□□ 0.38
DDX28-201ENST00000332395 SLC22A9Q8IVM8 553 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms