RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 AKT3Q9Y243 479 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 MFHAS1Q9Y4C4 1052 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 MKI67P46013 3256 aaKnown RBP18.21■□□□□ 0.51
PKP3-201ENST00000331563 CRYZL1O95825 349 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 ABCB1P08183 1280 aaPredicted RBP18.21■□□□□ 0.51
PKP3-201ENST00000331563 TSPY1Q01534 308 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 CCDC58Q4VC31 144 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 GPR142Q7Z601 462 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 CLEC14AQ86T13 490 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 COLGALT2Q8IYK4 626 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 KIAA2013Q8IYS2 634 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 LSMEM2Q8N112 164 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 SPATA6LQ8N4H0 392 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 ESX1Q8N693 406 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 ANKRD52Q8NB46 1076 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 OR52K1Q8NGK4 314 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 KCTD4Q8WVF5 259 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 DUS3LQ96G46 650 aaKnown RBP18.21■□□□□ 0.51
PKP3-201ENST00000331563 ZNF486Q96H40 463 aaPredicted RBP18.21■□□□□ 0.51
PKP3-201ENST00000331563 FAM167AQ96KS9 214 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 TMEM134Q9H6X4 195 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 SMPD3Q9NY59 655 aaPredicted RBP18.21■□□□□ 0.51
PKP3-201ENST00000331563 ZNF229Q9UJW7 825 aa18.21■□□□□ 0.51
PKP3-201ENST00000331563 ILVBLA1L0T0 632 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 CCDC78A2IDD5 438 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 TRIM64A6NGJ6 449 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 UNCXA6NJT0 531 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 ASB14A6NK59 587 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 RNF103O00237 685 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 MSI1O43347 362 aaKnown RBP18.2■□□□□ 0.5
PKP3-201ENST00000331563 NAT2P11245 290 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 HNRNPLP14866 589 aaKnown RBP eCLIP18.2■□□□□ 0.5
PKP3-201ENST00000331563 ELK4P28324 431 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 GPD2P43304 727 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 MAGEA12P43365 314 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 HLCSP50747 726 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 MPP1Q00013 466 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 USP10Q14694 798 aaKnown RBP18.2■□□□□ 0.5
PKP3-201ENST00000331563 CCNYL2Q5T2Q4 361 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 ZBTB8OSQ8IWT0 167 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 OR9I1Q8NGQ6 314 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 VPS39Q96JC1 886 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 TRIM15Q9C019 465 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 HOXD1Q9GZZ0 328 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 XYLT2Q9H1B5 865 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 LRRC37A2A6NM11 1700 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 NRP2O60462 931 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 SYNCRIPO60506 623 aaKnown RBP18.2■□□□□ 0.5
PKP3-201ENST00000331563 JRKO75564 520 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 PIGRP01833 764 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 CXCL8P10145 99 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 NCAM1P13591 858 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 TAS2R42Q7RTR8 314 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 DSG4Q86SJ6 1040 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 CENPNQ96H22 339 aaPredicted RBP18.2■□□□□ 0.5
PKP3-201ENST00000331563 SLC7A5P2Q9GIP4 190 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 LHPPQ9H008 270 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 LRRC40Q9H9A6 602 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 IARS2Q9NSE4 1012 aaKnown RBP18.2■□□□□ 0.5
PKP3-201ENST00000331563 FAM49BQ9NUQ9 324 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 TBC1D13Q9NVG8 400 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.2■□□□□ 0.5
PKP3-201ENST00000331563 ERAP1Q9NZ08 941 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 DTLQ9NZJ0 730 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 MOSPD1Q9UJG1 213 aa18.2■□□□□ 0.5
PKP3-201ENST00000331563 IGKV6-21A0A0C4DH24 114 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 SNAP29O95721 258 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 PTPN9P43378 593 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 KRT6CP48668 564 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 CCNA1P78396 465 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 IFRD2Q12894 506 aaPredicted RBP18.19■□□□□ 0.5
PKP3-201ENST00000331563 MXD4Q14582 209 aaPredicted RBP18.19■□□□□ 0.5
PKP3-201ENST00000331563 PPP1R3AQ16821 1122 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 PIGZQ86VD9 579 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 CMTR2Q8IYT2 770 aaKnown RBP18.19■□□□□ 0.5
PKP3-201ENST00000331563 SFRP1Q8N474 314 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 KDM1BQ8NB78 822 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 NPLOC4Q8TAT6 608 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 HCAR2Q8TDS4 363 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 TMEM181Q9P2C4 612 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 IL18RAPO95256 599 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 MBL2P11226 248 aaPredicted RBP18.19■□□□□ 0.5
PKP3-201ENST00000331563 CXCR2P25025 360 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 NKX2-5P52952 324 aaPredicted RBP18.19■□□□□ 0.5
PKP3-201ENST00000331563 SQLEQ14534 574 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 ZIK1Q3SY52 487 aaPredicted RBP18.19■□□□□ 0.5
PKP3-201ENST00000331563 TMTC4Q5T4D3 741 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 ATF7IP2Q5U623 682 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 BROXQ5VW32 411 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 IQSEC1Q6DN90 963 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 ZNF773Q6PK81 442 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 FSTL5Q8N475 847 aaPredicted RBP18.19■□□□□ 0.5
PKP3-201ENST00000331563 HDAC10Q969S8 669 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 TMEM176AQ96HP8 235 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 SLC25A23Q9BV35 468 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 DGCR6LQ9BY27 220 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 ELOVL4Q9GZR5 314 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 AGPAT4Q9NRZ5 378 aa18.19■□□□□ 0.5
PKP3-201ENST00000331563 HBP1O60381 514 aa18.18■□□□□ 0.5
PKP3-201ENST00000331563 C22orf31O95567 290 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms