RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 WDR45BQ5MNZ6 344 aa26.02■■□□□ 1.76
SMDT1-201ENST00000331479 LAIR1Q6GTX8 287 aa26.02■■□□□ 1.76
SMDT1-201ENST00000331479 CCDC70Q6NSX1 233 aa26.02■■□□□ 1.76
SMDT1-201ENST00000331479 TBL1YQ9BQ87 522 aa26.02■■□□□ 1.76
SMDT1-201ENST00000331479 FZD3Q9NPG1 666 aa26.02■■□□□ 1.76
SMDT1-201ENST00000331479 PILRBQ9UKJ0 227 aa26.02■■□□□ 1.76
SMDT1-201ENST00000331479 WDR87Q6ZQQ6 2873 aa26.02■■□□□ 1.76
SMDT1-201ENST00000331479 GOLGA6CA6NDK9 693 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 GOLGA6BA6NDN3 693 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 GOLGA8CPA6NN73 597 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 TM7SF2O76062 418 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 EPN2O95208 641 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 GOLGA6DP0CG33 693 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 GM2AP17900 193 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 HLA-DPA1P20036 260 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 LAMA1P25391 3075 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 TNNT3P45378 269 aaPredicted RBP26.01■■□□□ 1.75
SMDT1-201ENST00000331479 C2orf54Q08AI8 447 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 GPS1Q13098 491 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 LRRC66Q68CR7 880 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 DENND5AQ6IQ26 1287 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 C4orf22Q6V702 233 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 CYP2U1Q7Z449 544 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 C1orf216Q8TAB5 229 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 PIGKQ92643 395 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 SLCO2A1Q92959 643 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 KRT12Q99456 494 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 LRRC40Q9H9A6 602 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 GOLGA6AQ9NYA3 693 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 SPO11Q9Y5K1 396 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 MRFAP1Q9Y605 127 aa26.01■■□□□ 1.75
SMDT1-201ENST00000331479 WNT9AO14904 365 aa26■■□□□ 1.75
SMDT1-201ENST00000331479 GAS8O95995 478 aa26■■□□□ 1.75
SMDT1-201ENST00000331479 BASP1P80723 227 aaKnown RBP26■■□□□ 1.75
SMDT1-201ENST00000331479 PTSQ03393 145 aa26■■□□□ 1.75
SMDT1-201ENST00000331479 SETMARQ53H47 684 aaPredicted RBP26■■□□□ 1.75
SMDT1-201ENST00000331479 DENND2CQ68D51 928 aa26■■□□□ 1.75
SMDT1-201ENST00000331479 ZNF572Q7Z3I7 529 aaPredicted RBP26■■□□□ 1.75
SMDT1-201ENST00000331479 HSD11B1LQ7Z5J1 315 aa26■■□□□ 1.75
SMDT1-201ENST00000331479 CBARPQ8N350 705 aaPredicted RBP26■■□□□ 1.75
SMDT1-201ENST00000331479 MYOCQ99972 504 aa26■■□□□ 1.75
SMDT1-201ENST00000331479 ARRDC1-AS1Q9H2J1 176 aa26■■□□□ 1.75
SMDT1-201ENST00000331479 TPX2Q9ULW0 747 aaKnown RBP26■■□□□ 1.75
SMDT1-201ENST00000331479 E7EVH7 732 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 RAD51BO15315 384 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 CLDN7O95471 211 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 FGF1P05230 155 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 APRTP07741 180 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 TERF1P54274 439 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 SGCGQ13326 291 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 ARHGEF7Q14155 803 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 MAGEE1Q9HCI5 957 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 SHOC2Q9UQ13 582 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 CA5BQ9Y2D0 317 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 C1orf232A0A0U1RR37 186 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 PSMD3O43242 534 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 LZTS3O60299 673 aaPredicted RBP25.99■■□□□ 1.75
SMDT1-201ENST00000331479 DR1Q01658 176 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 PPP1R7Q15435 360 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 CCDC6Q16204 474 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 WHAMMP3Q1A5X7 153 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 LYSMD3Q7Z3D4 306 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 SYT12Q8IV01 421 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 ZCCHC9Q8N567 271 aaKnown RBP25.99■■□□□ 1.75
SMDT1-201ENST00000331479 EID2BQ96D98 161 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 SERAC1Q96JX3 654 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 SLC6A18Q96N87 628 aa25.99■■□□□ 1.75
SMDT1-201ENST00000331479 KLF6Q99612 283 aaPredicted RBP25.99■■□□□ 1.75
SMDT1-201ENST00000331479 PIH1D1Q9NWS0 290 aaKnown RBP25.99■■□□□ 1.75
SMDT1-201ENST00000331479 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.98■■□□□ 1.75
SMDT1-201ENST00000331479 AURKAO14965 403 aa25.98■■□□□ 1.75
SMDT1-201ENST00000331479 RECQL5O94762 991 aaPredicted RBP25.98■■□□□ 1.75
SMDT1-201ENST00000331479 SUN1O94901 812 aa25.98■■□□□ 1.75
SMDT1-201ENST00000331479 C1SP09871 688 aa25.98■■□□□ 1.75
SMDT1-201ENST00000331479 GRIA1P42261 906 aa25.98■■□□□ 1.75
SMDT1-201ENST00000331479 LMAN1P49257 510 aa25.98■■□□□ 1.75
SMDT1-201ENST00000331479 CKAP4Q07065 602 aaKnown RBP25.98■■□□□ 1.75
SMDT1-201ENST00000331479 ACOX1Q15067 660 aa25.98■■□□□ 1.75
SMDT1-201ENST00000331479 PEAR1Q5VY43 1037 aaPredicted RBP25.98■■□□□ 1.75
SMDT1-201ENST00000331479 RFLNAQ6ZTI6 216 aa25.98■■□□□ 1.75
SMDT1-201ENST00000331479 ASB12Q8WXK4 309 aa25.98■■□□□ 1.75
SMDT1-201ENST00000331479 COQ10AQ96MF6 247 aa25.98■■□□□ 1.75
SMDT1-201ENST00000331479 RUNDC3BQ96NL0 473 aa25.98■■□□□ 1.75
SMDT1-201ENST00000331479 ARNT2Q9HBZ2 717 aa25.98■■□□□ 1.75
SMDT1-201ENST00000331479 DMTF1Q9Y222 760 aa25.98■■□□□ 1.75
SMDT1-201ENST00000331479 ZNF711Q9Y462 761 aa25.98■■□□□ 1.75
SMDT1-201ENST00000331479 TCRBV7S3A2A0A539 114 aa25.97■■□□□ 1.75
SMDT1-201ENST00000331479 ERI2A8K979 691 aaKnown RBP25.97■■□□□ 1.75
SMDT1-201ENST00000331479 ESPNB1AK53 854 aa25.97■■□□□ 1.75
SMDT1-201ENST00000331479 ZNF500O60304 480 aaPredicted RBP25.97■■□□□ 1.75
SMDT1-201ENST00000331479 RETP07949 1114 aa25.97■■□□□ 1.75
SMDT1-201ENST00000331479 ZNF30P17039 623 aa25.97■■□□□ 1.75
SMDT1-201ENST00000331479 HNRNPA2B1P22626 353 aaKnown RBP25.97■■□□□ 1.75
SMDT1-201ENST00000331479 ETV3P41162 512 aa25.97■■□□□ 1.75
SMDT1-201ENST00000331479 STC1P52823 247 aa25.97■■□□□ 1.75
SMDT1-201ENST00000331479 MRPS25P82663 173 aaKnown RBP25.97■■□□□ 1.75
SMDT1-201ENST00000331479 MSLNQ13421 630 aaPredicted RBP25.97■■□□□ 1.75
SMDT1-201ENST00000331479 TM9SF3Q9HD45 589 aa25.97■■□□□ 1.75
SMDT1-201ENST00000331479 PCDHGA5Q9Y5G8 931 aa25.97■■□□□ 1.75
SMDT1-201ENST00000331479 DNAH14Q0VDD8 3507 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms