RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 DPY19L3Q6ZPD9 716 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 CCNJLQ8IV13 435 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 MMAAQ8IVH4 418 aaKnown RBP15.93■□□□□ 0.14
PDGFB-201ENST00000331163 CRIPAKQ8N1N5 446 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 CLDN19Q8N6F1 224 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 CHST14Q8NCH0 376 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 CLP1Q92989 425 aaKnown RBP15.93■□□□□ 0.14
PDGFB-201ENST00000331163 HACD3Q9P035 362 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 FNIP2Q9P278 1114 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 FKBPLQ9UIM3 349 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 ALADP13716 330 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 SEMA3BQ13214 749 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 KHDC1Q4VXA5 237 aaKnown RBP15.93■□□□□ 0.14
PDGFB-201ENST00000331163 PCID2Q5JVF3 399 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 TMEM31Q5JXX7 168 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 FBXL19Q6PCT2 694 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 SLCO2A1Q92959 643 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 SERAC1Q96JX3 654 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 GAS2L1Q99501 681 aaPredicted RBP15.93■□□□□ 0.14
PDGFB-201ENST00000331163 MICAL3Q7RTP6 2002 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 A0A096LPK6 155 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 IQCF5A8MTL0 148 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 HCAR3P49019 387 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 MAPKAPK2P49137 400 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 LAMB3Q13751 1172 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 ACOX1Q15067 660 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 CHI3L2Q15782 390 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 DCBLD1Q8N8Z6 715 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 CSGALNACT1Q8TDX6 532 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 ATP6V1E2Q96A05 226 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 ZNF419Q96HQ0 510 aaPredicted RBP15.93■□□□□ 0.14
PDGFB-201ENST00000331163 MRGPRX2Q96LB1 330 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 SRPK1Q96SB4 655 aaKnown RBP15.93■□□□□ 0.14
PDGFB-201ENST00000331163 FOXP3Q9BZS1 431 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 GPAMQ9HCL2 828 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 FBXO5Q9UKT4 447 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 DNAJC16Q9Y2G8 782 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 TEX264Q9Y6I9 313 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 MYO10Q9HD67 2058 aa15.93■□□□□ 0.14
PDGFB-201ENST00000331163 CLDN7O95471 211 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 GUCA1CO95843 209 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 PYGLP06737 847 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 ETS2P15036 469 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 SERPINA4P29622 427 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 WDR4P57081 412 aaKnown RBP15.92■□□□□ 0.14
PDGFB-201ENST00000331163 MRPS35P82673 323 aaKnown RBP15.92■□□□□ 0.14
PDGFB-201ENST00000331163 PITRM1Q5JRX3 1037 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 N4BP2L1Q5TBK1 243 aaPredicted RBP15.92■□□□□ 0.14
PDGFB-201ENST00000331163 CNSTQ6PJW8 725 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 LYSMD3Q7Z3D4 306 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 UMODL1-AS1Q8N2C9 162 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 GABPB2Q8TAK5 448 aaPredicted RBP15.92■□□□□ 0.14
PDGFB-201ENST00000331163 ESAMQ96AP7 390 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 C1orf74Q96LT6 269 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 MAGEB18Q96M61 343 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 TTLL2Q9BWV7 592 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 ASB8Q9H765 288 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 NMRK1Q9NWW6 199 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 PCDHA11Q9Y5I1 949 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 RIF1Q5UIP0 2472 aaKnown RBP15.92■□□□□ 0.14
PDGFB-201ENST00000331163 HEATR9A2RTY3 570 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 H3BNC9 293 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 PRAMEF11O60813 436 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 HAUS5O94927 633 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 ADH5P11766 374 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 ARSDP51689 593 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 SNRPD1P62314 119 aaKnown RBP15.92■□□□□ 0.14
PDGFB-201ENST00000331163 ECT2LQ008S8 904 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 BOP1Q14137 746 aaKnown RBP15.92■□□□□ 0.14
PDGFB-201ENST00000331163 DHCR24Q15392 516 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 SLC1A5Q15758 541 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 SNX30Q5VWJ9 437 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 SFTPA1Q8IWL2 248 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 TDHQ8IZJ6 230 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 PGBD5Q8N414 524 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 PPFIBP2Q8ND30 876 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 ROPN1BQ9BZX4 212 aaPredicted RBP15.92■□□□□ 0.14
PDGFB-201ENST00000331163 ZNF395Q9H8N7 513 aaPredicted RBP15.92■□□□□ 0.14
PDGFB-201ENST00000331163 ROPN1Q9HAT0 212 aaPredicted RBP15.92■□□□□ 0.14
PDGFB-201ENST00000331163 ILVBLA1L0T0 632 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 TP73O15350 636 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 SYNCRIPO60506 623 aaKnown RBP15.92■□□□□ 0.14
PDGFB-201ENST00000331163 C11orf91Q3C1V1 193 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 ASRGL1Q7L266 308 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 KCTD4Q8WVF5 259 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 IGSF9Q9P2J2 1179 aa15.92■□□□□ 0.14
PDGFB-201ENST00000331163 GYG2O15488 501 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 TULP3O75386 442 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 ITGA2BP08514 1039 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 ATP6V1C1P21283 382 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 HADHAP40939 763 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 KPNB1Q14974 876 aaKnown RBP15.91■□□□□ 0.14
PDGFB-201ENST00000331163 C4orf22Q6V702 233 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 AGGF1Q8N302 714 aaeCLIP15.91■□□□□ 0.14
PDGFB-201ENST00000331163 SCG3Q8WXD2 468 aaKnown RBP15.91■□□□□ 0.14
PDGFB-201ENST00000331163 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.91■□□□□ 0.142e-6■■■■■ 54.9
PDGFB-201ENST00000331163 TTC1Q99614 292 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 SPATA16Q9BXB7 569 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 POLR3BQ9NW08 1133 aaPredicted RBP15.91■□□□□ 0.14
PDGFB-201ENST00000331163 ADH1CP00326 375 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms