RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 PCDHGA8Q9Y5G5 932 aa18.18■□□□□ 0.5
RAB28-202ENST00000330852 A0A087X0T9 212 aa18.17■□□□□ 0.5
RAB28-202ENST00000330852 PRKCGP05129 697 aa18.17■□□□□ 0.5
RAB28-202ENST00000330852 FAM228BP0C875 321 aa18.17■□□□□ 0.5
RAB28-202ENST00000330852 TSR1Q2NL82 804 aaKnown RBP18.17■□□□□ 0.5
RAB28-202ENST00000330852 PERM1Q5SV97 790 aa18.17■□□□□ 0.5
RAB28-202ENST00000330852 RD3Q7Z3Z2 195 aa18.17■□□□□ 0.5
RAB28-202ENST00000330852 TP53INP2Q8IXH6 220 aa18.17■□□□□ 0.5
RAB28-202ENST00000330852 FUBP1Q96AE4 644 aaKnown RBP18.17■□□□□ 0.5
RAB28-202ENST00000330852 UBL7Q96S82 380 aaPredicted RBP18.17■□□□□ 0.5
RAB28-202ENST00000330852 CCDC3Q9BQI4 270 aa18.17■□□□□ 0.5
RAB28-202ENST00000330852 ETNK2Q9NVF9 386 aa18.17■□□□□ 0.5
RAB28-202ENST00000330852 GPR34Q9UPC5 381 aa18.17■□□□□ 0.5
RAB28-202ENST00000330852 ENTPD2Q9Y5L3 495 aa18.17■□□□□ 0.5
RAB28-202ENST00000330852 TMX2-CTNND1H3BSU7 103 aa18.16■□□□□ 0.5
RAB28-202ENST00000330852 PSMD11O00231 422 aa18.16■□□□□ 0.5
RAB28-202ENST00000330852 TPM3P06753 285 aa18.16■□□□□ 0.5
RAB28-202ENST00000330852 CYP2A6P11509 494 aaPredicted RBP18.16■□□□□ 0.5
RAB28-202ENST00000330852 KRT10P13645 584 aa18.16■□□□□ 0.5
RAB28-202ENST00000330852 TCF4P15884 667 aa18.16■□□□□ 0.5
RAB28-202ENST00000330852 MMP13P45452 471 aa18.16■□□□□ 0.5
RAB28-202ENST00000330852 SPIDRQ14159 915 aa18.16■□□□□ 0.5
RAB28-202ENST00000330852 KRT81Q14533 505 aa18.16■□□□□ 0.5
RAB28-202ENST00000330852 ACOX1Q15067 660 aa18.16■□□□□ 0.5
RAB28-202ENST00000330852 CCDC122Q5T0U0 273 aa18.16■□□□□ 0.5
RAB28-202ENST00000330852 PNCKQ6P2M8 343 aa18.16■□□□□ 0.5
RAB28-202ENST00000330852 PLA2G15Q8NCC3 412 aa18.16■□□□□ 0.5
RAB28-202ENST00000330852 PCDH19Q8TAB3 1148 aa18.16■□□□□ 0.5
RAB28-202ENST00000330852 CPLX3Q8WVH0 158 aa18.16■□□□□ 0.5
RAB28-202ENST00000330852 COQ10AQ96MF6 247 aa18.16■□□□□ 0.5
RAB28-202ENST00000330852 HAUS2Q9NVX0 235 aa18.16■□□□□ 0.5
RAB28-202ENST00000330852 GULP1Q9UBP9 304 aa18.16■□□□□ 0.5
RAB28-202ENST00000330852 B4GALT6Q9UBX8 382 aa18.16■□□□□ 0.5
RAB28-202ENST00000330852 PCDHGC4Q9Y5F7 938 aa18.16■□□□□ 0.5
RAB28-202ENST00000330852 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.16■□□□□ 0.5
RAB28-202ENST00000330852 NTN3O00634 580 aaPredicted RBP18.15■□□□□ 0.5
RAB28-202ENST00000330852 CPP00450 1065 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 CES1P23141 567 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 RBMS1P29558 406 aaKnown RBP18.15■□□□□ 0.5
RAB28-202ENST00000330852 HNRNPH3P31942 346 aaKnown RBP18.15■□□□□ 0.5
RAB28-202ENST00000330852 VIPR1P32241 457 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 UCNP55089 124 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 NDUFAF2Q8N183 169 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 CBARPQ8N350 705 aaPredicted RBP18.15■□□□□ 0.5
RAB28-202ENST00000330852 LSM14AQ8ND56 463 aaKnown RBP18.15■□□□□ 0.5
RAB28-202ENST00000330852 NSMCE3Q96MG7 304 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 LGMNQ99538 433 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 DPH1Q9BZG8 443 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 WDR26Q9H7D7 661 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 NOD2Q9HC29 1040 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 ASCL3Q9NQ33 180 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 CELA2BP08218 269 aaPredicted RBP18.15■□□□□ 0.5
RAB28-202ENST00000330852 GM2AP17900 193 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 TEAD1P28347 426 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 TLE3Q04726 772 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 BROXQ5VW32 411 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 TXNRD3NBQ6F5E7 133 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 OGFOD3Q6PK18 319 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 SPACA3Q8IXA5 215 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 PGBD5Q8N414 524 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 TEX26Q8N6G2 289 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 GPR156Q8NFN8 814 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 WDR36Q8NI36 951 aaKnown RBP18.15■□□□□ 0.5
RAB28-202ENST00000330852 OR1E3Q8WZA6 343 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 FATE1Q969F0 183 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 CCDC97Q96F63 343 aaPredicted RBP18.15■□□□□ 0.5
RAB28-202ENST00000330852 SCRN2Q96FV2 425 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 ATXN7L3BQ96GX2 97 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 SLC46A1Q96NT5 459 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 PHPT1Q9NRX4 125 aaPredicted RBP18.15■□□□□ 0.5
RAB28-202ENST00000330852 UVRAGQ9P2Y5 699 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 AMACRQ9UHK6 382 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 SATB2Q9UPW6 733 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 PPIL1Q9Y3C6 166 aa18.15■□□□□ 0.5
RAB28-202ENST00000330852 BPTFQ12830 3046 aa18.14■□□□□ 0.5
RAB28-202ENST00000330852 FASNP49327 2511 aaKnown RBP18.14■□□□□ 0.49
RAB28-202ENST00000330852 TMEM202A6NGA9 273 aa18.14■□□□□ 0.49
RAB28-202ENST00000330852 TK2O00142 265 aa18.14■□□□□ 0.49
RAB28-202ENST00000330852 HEXIM1O94992 359 aaKnown RBP18.14■□□□□ 0.49
RAB28-202ENST00000330852 GYPCP04921 128 aa18.14■□□□□ 0.49
RAB28-202ENST00000330852 PNLIPP16233 465 aa18.14■□□□□ 0.49
RAB28-202ENST00000330852 IL4RP24394 825 aa18.14■□□□□ 0.49
RAB28-202ENST00000330852 CCDC173Q0VFZ6 552 aa18.14■□□□□ 0.49
RAB28-202ENST00000330852 PDK2Q15119 407 aa18.14■□□□□ 0.49
RAB28-202ENST00000330852 ARMC12Q5T9G4 340 aa18.14■□□□□ 0.49
RAB28-202ENST00000330852 TIGD7Q6NT04 549 aaPredicted RBP18.14■□□□□ 0.49
RAB28-202ENST00000330852 KYQ8NBH2 561 aa18.14■□□□□ 0.49
RAB28-202ENST00000330852 PDCD6IPQ8WUM4 868 aaKnown RBP18.14■□□□□ 0.49
RAB28-202ENST00000330852 NUS1Q96E22 293 aa18.14■□□□□ 0.49
RAB28-202ENST00000330852 PDXPQ96GD0 296 aa18.14■□□□□ 0.49
RAB28-202ENST00000330852 BTBD6Q96KE9 485 aa18.14■□□□□ 0.49
RAB28-202ENST00000330852 FGF22Q9HCT0 170 aa18.14■□□□□ 0.49
RAB28-202ENST00000330852 IFNKQ9P0W0 207 aa18.14■□□□□ 0.49
RAB28-202ENST00000330852 CCDC187A0A096LP49 1063 aa18.13■□□□□ 0.49
RAB28-202ENST00000330852 TEX51A0A1B0GUA7 166 aa18.13■□□□□ 0.49
RAB28-202ENST00000330852 EIF4E1BA6NMX2 242 aaKnown RBP18.13■□□□□ 0.49
RAB28-202ENST00000330852 PGLSO95336 258 aa18.13■□□□□ 0.49
RAB28-202ENST00000330852 MYCLP1P12525 358 aaPredicted RBP18.13■□□□□ 0.49
RAB28-202ENST00000330852 EIF3IQ13347 325 aaKnown RBP18.13■□□□□ 0.49
RAB28-202ENST00000330852 COL9A2Q14055 689 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms