RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ARNT2Q9HBZ2 717 aa18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 CD320Q9NPF0 282 aa18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 ARHGEF3Q9NR81 526 aa18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 CHKBQ9Y259 395 aa18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 ATG2BQ96BY7 2078 aa18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 LOC285095A0A1B0GVY8 99 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 SIN3BO75182 1162 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 POP4O95707 220 aaKnown RBP18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 PRLP01236 227 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 ATXN1LP0C7T5 689 aaKnown RBP18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 CDK18Q07002 472 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 ENPP2Q13822 863 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 PCID2Q5JVF3 399 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 C9orf64Q5T6V5 341 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 TAX1BP1Q86VP1 789 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 CHPFQ8IZ52 775 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 GRIN3AQ8TCU5 1115 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 ERLEC1Q96DZ1 483 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 IFT43Q96FT9 208 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 APOPT1Q96IL0 206 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 ATP13A3Q9H7F0 1226 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 MRM3Q9HC36 420 aaKnown RBP18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 NDRG2Q9UN36 371 aaKnown RBP18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 EBAG9O00559 213 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 UGT1A9O60656 530 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 PDHA1P08559 390 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 BCL2L1Q07817 233 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 GALNT3Q14435 633 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 SIRPB2Q5JXA9 342 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 PACS1Q6VY07 963 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 UNC5BQ8IZJ1 945 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 STK40Q8N2I9 435 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 PDCD6IPQ8WUM4 868 aaKnown RBP18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 HEPHQ9BQS7 1158 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 NSRP1Q9H0G5 558 aaKnown RBP18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 UGT1A7Q9HAW7 530 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 UGT1A10Q9HAW8 530 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 UGT1A8Q9HAW9 530 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 MLXIPLQ9NP71 852 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 MKS1Q9NXB0 559 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 ZFATQ9P243 1243 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 WASF2Q9Y6W5 498 aa18.84■□□□□ 0.61
EXOSC3-201ENST00000327304 KRBA1A5PL33 1030 aa18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 MAN2B1O00754 1011 aa18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 TRAFD1O14545 582 aaPredicted RBP18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 EPHX1P07099 455 aa18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 CTSLP07711 333 aa18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 TPH1P17752 444 aa18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 CCNFP41002 786 aa18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 HNRNPH2P55795 449 aaKnown RBP18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 CCINQ13939 588 aa18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 SLC1A5Q15758 541 aa18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 PKN3Q6P5Z2 889 aa18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 FOXR1Q6PIV2 292 aa18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 ZNF852Q6ZMS4 543 aa18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 RASSF3Q86WH2 238 aa18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 SPATS2Q86XZ4 545 aaKnown RBP18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 LRRC34Q8IZ02 419 aa18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 GDAP1Q8TB36 358 aa18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 TUBGCP5Q96RT8 1024 aa18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 CPNE1Q99829 537 aa18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 CPEB1Q9BZB8 566 aaKnown RBP18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 FAM107BQ9H098 131 aa18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 CHRAC1Q9NRG0 131 aa18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 FBXL21Q9UKT6 434 aa18.83■□□□□ 0.6
EXOSC3-201ENST00000327304 NPC1O15118 1278 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 RFPL1O75677 317 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 NDST3O95803 873 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 UGT2B4P06133 528 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 VIMP08670 466 aaKnown RBP18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 PYGBP11216 843 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 SERPINA4P29622 427 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 NEK3P51956 506 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 PRKCQQ04759 706 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 RAD51Q06609 339 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 GRTP1Q5TC63 336 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 CES3Q6UWW8 571 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 RGS9BPQ6ZS82 235 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 GJD3Q8N144 294 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 IL17RCQ8NAC3 791 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 PPHLN1Q8NEY8 458 aaKnown RBP18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 TCP10LQ8TDR4 215 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 MFSD3Q96ES6 412 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 PRSS16Q9NQE7 514 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 TXNDC16Q9P2K2 825 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 WNT16Q9UBV4 365 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 IL36AQ9UHA7 158 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 MUTYHQ9UIF7 546 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 PCDHB9Q9Y5E1 797 aa18.82■□□□□ 0.6
EXOSC3-201ENST00000327304 HMX2A2RU54 273 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 GOLGA8RI6L899 631 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 HTRA2O43464 458 aaPredicted RBP18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 FZD6O60353 706 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 SOCS5O75159 536 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 LEFTY1O75610 366 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 KLF8O95600 359 aaPredicted RBP18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 EPOP01588 193 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 GP5P40197 560 aa18.81■□□□□ 0.6
EXOSC3-201ENST00000327304 SEPT7Q16181 437 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms