RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 THEM5Q8N1Q8 247 aa19.94■□□□□ 0.78
SOX2-201ENST00000325404 SCAMP5Q8TAC9 235 aa19.94■□□□□ 0.78
SOX2-201ENST00000325404 CASP10Q92851 521 aa19.94■□□□□ 0.78
SOX2-201ENST00000325404 LPPQ93052 612 aa19.94■□□□□ 0.78
SOX2-201ENST00000325404 HAUS8Q9BT25 410 aa19.94■□□□□ 0.78
SOX2-201ENST00000325404 TRMT13Q9NUP7 481 aaKnown RBP19.94■□□□□ 0.78
SOX2-201ENST00000325404 HS3ST4Q9Y661 456 aa19.94■□□□□ 0.78
SOX2-201ENST00000325404 MRASO14807 208 aa19.94■□□□□ 0.78
SOX2-201ENST00000325404 HSPA8P11142 646 aaKnown RBP19.94■□□□□ 0.78
SOX2-201ENST00000325404 IKBKEQ14164 716 aa19.94■□□□□ 0.78
SOX2-201ENST00000325404 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.94■□□□□ 0.78
SOX2-201ENST00000325404 GALNT4Q8N4A0 578 aa19.94■□□□□ 0.78
SOX2-201ENST00000325404 GOLM1Q8NBJ4 401 aa19.94■□□□□ 0.78
SOX2-201ENST00000325404 OR13J1Q8NGT2 312 aa19.94■□□□□ 0.78
SOX2-201ENST00000325404 PEX13Q92968 403 aa19.94■□□□□ 0.78
SOX2-201ENST00000325404 SERPINB11Q96P15 392 aa19.94■□□□□ 0.78
SOX2-201ENST00000325404 SRP72O76094 671 aaKnown RBP19.93■□□□□ 0.78
SOX2-201ENST00000325404 GNRH1P01148 92 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 USP46P62068 366 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 ZNF789Q5FWF6 425 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 KLHDC10Q6PID8 442 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 CD300LGQ6UXG3 332 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 LRRTM3Q86VH5 581 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 ZUFSPQ96AP4 578 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 TADA1Q96BN2 335 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 HIC2Q96JB3 615 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 GLT1D1Q96MS3 346 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 UROC1Q96N76 676 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 PAAF1Q9BRP4 392 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 NOL6Q9H6R4 1146 aaKnown RBP19.93■□□□□ 0.78
SOX2-201ENST00000325404 CYP4F12Q9HCS2 524 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 TNFRSF12AQ9NP84 129 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 MTF2Q9Y483 593 aaPredicted RBP19.93■□□□□ 0.78
SOX2-201ENST00000325404 PRORSD1PA6NEY8 169 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 FGF4P08620 206 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 SLC2A3P11169 496 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 TCN1P20061 433 aaPredicted RBP19.93■□□□□ 0.78
SOX2-201ENST00000325404 APLP1P51693 650 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 TSPY1Q01534 308 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 SPATS1Q496A3 300 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 ZNF678Q5SXM1 525 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 SCD5Q86SK9 330 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 PCYOX1LQ8NBM8 494 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 FAM156AQ8NDB6 213 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 CYP2S1Q96SQ9 504 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 PRPF18Q99633 342 aaKnown RBP19.93■□□□□ 0.78
SOX2-201ENST00000325404 UNKQ9C0B0 810 aaKnown RBP19.93■□□□□ 0.78
SOX2-201ENST00000325404 ARMC1Q9NVT9 282 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 PCDHGB4Q9UN71 923 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 PCDHGB5Q9Y5G0 923 aa19.93■□□□□ 0.78
SOX2-201ENST00000325404 NYNRINQ9P2P1 1898 aaKnown RBP19.92■□□□□ 0.78
SOX2-201ENST00000325404 S1PR4O95977 384 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 ASLP04424 464 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 TYMPP19971 482 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 SLC5A3P53794 718 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 LAMB3Q13751 1172 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 LPIN1Q14693 890 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 ZNF280DQ6N043 979 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 PRMT9Q6P2P2 845 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 CARM1Q86X55 608 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 CLYBLQ8N0X4 340 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 TEX26Q8N6G2 289 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 ANKFN1Q8N957 763 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 OR10T2Q8NGX3 314 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 SLCO4A1Q96BD0 722 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 NMD3Q96D46 503 aaKnown RBP19.92■□□□□ 0.78
SOX2-201ENST00000325404 ATXN3LQ9H3M9 355 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 COQ10BQ9H8M1 238 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 CCDC167Q9P0B6 97 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 ATXN10Q9UBB4 475 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 APPL1Q9UKG1 709 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 TMCO1Q9UM00 188 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 DNAH12Q6ZR08 3092 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 MOXD2PA6NHM9 499 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 B3GAT3O94766 335 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 STAMBPO95630 424 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 RHOQP17081 205 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 TRIM71Q2Q1W2 868 aaKnown RBP19.92■□□□□ 0.78
SOX2-201ENST00000325404 MYLK3Q32MK0 819 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 OVOS1Q6IE37 1185 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 MSANTD2Q6P1R3 559 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 CYHR1Q6ZMK1 362 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 ARHGAP22Q7Z5H3 698 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 ISCA2Q86U28 154 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 ZFP28Q8NHY6 868 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 MPP4Q96JB8 637 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 HOPXQ9BPY8 73 aaPredicted RBP19.92■□□□□ 0.78
SOX2-201ENST00000325404 PCDHAC1Q9H158 963 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 POPDC3Q9HBV1 291 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 SFMBT1Q9UHJ3 866 aa19.92■□□□□ 0.78
SOX2-201ENST00000325404 PTPRDP23468 1912 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 MGEA5O60502 916 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 BMP2P12643 396 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 STX1BP61266 288 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 HERVK_113P63132 956 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 ACVR1Q04771 509 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 PPP1R3AQ16821 1122 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 UGT3A2Q3SY77 523 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 C6orf10Q5SRN2 563 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 IYDQ6PHW0 289 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms