RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	GK	P32189	559 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	SKIV2L2	P42285	1042 aa	Known RBP	11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	WASHC5	Q12768	1159 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	RALGDS	Q12967	914 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	COL9A2	Q14055	689 aa	Predicted RBP	11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	CRY1	Q16526	586 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	AP5B1	Q2VPB7	878 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	AMIGO2	Q86SJ2	522 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	PIM3	Q86V86	326 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	GDPD5	Q8WTR4	605 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	ACAT2	Q9BWD1	397 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	SH3BP4	Q9P0V3	963 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	IGSF9	Q9P2J2	1179 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	NHS	Q6T4R5	1651 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	TLL1	O43897	1013 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	SIN3B	O75182	1162 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	HAPLN1	P10915	354 aa	Predicted RBP	11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	SYN1	P17600	705 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	UGT1A6	P19224	532 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	UGT1A1	P22309	533 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	UGT1A4	P22310	534 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	UGT1A3	P35503	534 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	UGT1A5	P35504	534 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	ARHGDIA	P52565	204 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	PITRM1	Q5JRX3	1037 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	PPP1R15B	Q5SWA1	713 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	PIWIL4	Q7Z3Z4	852 aa	Known RBP	11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	C2orf73	Q8N5S3	287 aa	Predicted RBP	11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	IRGQ	Q8WZA9	623 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	ASPSCR1	Q9BZE9	553 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	CYLD	Q9NQC7	956 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	ANKRD6	Q9Y2G4	727 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	TDRKH	Q9Y2W6	561 aa	Known RBP	11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	NPEPPSL1	A6NEC2	478 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	UBXN8	O00124	270 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	GJB5	O95377	273 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	MT-ND1	P03886	318 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	NTRK1	P04629	796 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	PIK3R1	P27986	724 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	HNF4A	P41235	474 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	AIF1	P55008	147 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	ABR	Q12979	859 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	TCEAL1	Q15170	157 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	KHDC1	Q4VXA5	237 aa	Known RBP	11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	CUZD1	Q86UP6	607 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	ZNF786	Q8N393	782 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	FIG4	Q92562	907 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	FAR2	Q96K12	515 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	TUBGCP6	Q96RT7	1819 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	TRAV19	A0A0A6YYK7	116 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	ABLIM1	O14639	778 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	H2AFY	O75367	372 aa	Known RBP	11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	CLDN11	O75508	207 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	FGF1	P05230	155 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	EPB42	P16452	691 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	TYMP	P19971	482 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	MSH3	P20585	1137 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	KLF10	Q13118	480 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	NAB1	Q13506	487 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	WASHC2D	Q5SRD0	308 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	TEDDM1	Q5T9Z0	273 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	ZBTB49	Q6ZSB9	765 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	FAXDC2	Q96IV6	333 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	CDH19	Q9H159	772 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	ETAA1	Q9NY74	926 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	KIF17	Q9P2E2	1029 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	GGA2	Q9UJY4	613 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	EIF3L	Q9Y262	564 aa	Known RBP	11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	TRAF6	Q9Y4K3	522 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	ACTL7A	Q9Y615	435 aa		11.86	□□□□□ -0.51
DDR1-223	ENST00000324771	ZNF682	O95780	498 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	IL1B	P01584	269 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	SERPINA6	P08185	405 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	ATP6V1B2	P21281	511 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	TSTD2	Q5T7W7	516 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	KCTD13	Q8WZ19	329 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	NTAN1	Q96AB6	310 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	TMEM159	Q96B96	161 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	FCRL3	Q96P31	734 aa	Predicted RBP	11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	VPS45	Q9NRW7	570 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	SLC13A4	Q9UKG4	626 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	PTPRZ1	P23471	2315 aa	Predicted RBP	11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	CCDC162P	A2VCL2	907 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	ZNF839	A8K0R7	811 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	RAD51B	O15315	384 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	BIRC5	O15392	142 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	ZSCAN9	O15535	394 aa	Predicted RBP	11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	LRAT	O95237	230 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	NDST3	O95803	873 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	ALPI	P09923	528 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	POLR2E	P19388	210 aa	Known RBP	11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	HLA-DPA1	P20036	260 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	USP46	P62068	366 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	TSN	Q15631	228 aa	Known RBP	11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	TRIP4	Q15650	581 aa	Predicted RBP	11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	SPDYE7P	Q495Y7	208 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	TBCEL	Q5QJ74	424 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	CPNE9	Q8IYJ1	553 aa		11.85	□□□□□ -0.51

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