RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 PIDD1Q9HB75 910 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 FAM149AA5PLN7 773 aa14.77□□□□□ -0.04
TCOF1-201ENST00000323668 PRRG1O14668 218 aa14.77□□□□□ -0.04
TCOF1-201ENST00000323668 DLX3O60479 287 aa14.77□□□□□ -0.04
TCOF1-201ENST00000323668 BRCC3P46736 316 aa14.77□□□□□ -0.04
TCOF1-201ENST00000323668 USP46P62068 366 aa14.77□□□□□ -0.04
TCOF1-201ENST00000323668 MRPS15P82914 257 aaKnown RBP14.77□□□□□ -0.04
TCOF1-201ENST00000323668 OLIG2Q13516 323 aa14.77□□□□□ -0.04
TCOF1-201ENST00000323668 SYTL3Q4VX76 610 aa14.77□□□□□ -0.04
TCOF1-201ENST00000323668 KIAA0930Q6ICG6 404 aaPredicted RBP14.77□□□□□ -0.04
TCOF1-201ENST00000323668 GPR142Q7Z601 462 aa14.77□□□□□ -0.04
TCOF1-201ENST00000323668 PLD6Q8N2A8 252 aaKnown RBP14.77□□□□□ -0.04
TCOF1-201ENST00000323668 AADATQ8N5Z0 425 aa14.77□□□□□ -0.04
TCOF1-201ENST00000323668 IRGQQ8WZA9 623 aa14.77□□□□□ -0.04
TCOF1-201ENST00000323668 ASB9Q96DX5 294 aa14.77□□□□□ -0.04
TCOF1-201ENST00000323668 MLPHQ9BV36 600 aaPredicted RBP14.77□□□□□ -0.04
TCOF1-201ENST00000323668 KLHL25Q9H0H3 589 aa14.77□□□□□ -0.04
TCOF1-201ENST00000323668 SLC25A51Q9H1U9 297 aa14.77□□□□□ -0.04
TCOF1-201ENST00000323668 PARNO95453 639 aaKnown RBP14.77□□□□□ -0.04
TCOF1-201ENST00000323668 STAU1O95793 577 aaKnown RBP14.77□□□□□ -0.04
TCOF1-201ENST00000323668 PCNAP12004 261 aa14.77□□□□□ -0.04
TCOF1-201ENST00000323668 CCNA2P20248 432 aa14.77□□□□□ -0.04
TCOF1-201ENST00000323668 LRRC74AQ0VAA2 488 aa14.77□□□□□ -0.04
TCOF1-201ENST00000323668 PAFAH1B3Q15102 231 aaKnown RBP14.77□□□□□ -0.04
TCOF1-201ENST00000323668 GPR22Q99680 433 aa14.77□□□□□ -0.04
TCOF1-201ENST00000323668 AGO3Q9H9G7 860 aaKnown RBP14.77□□□□□ -0.04
TCOF1-201ENST00000323668 HMG20AQ9NP66 347 aa14.77□□□□□ -0.04
TCOF1-201ENST00000323668 TMPRSS4Q9NRS4 437 aa14.77□□□□□ -0.04
TCOF1-201ENST00000323668 ABT1Q9ULW3 272 aaKnown RBP14.77□□□□□ -0.04
TCOF1-201ENST00000323668 DDX60Q8IY21 1712 aaKnown RBP14.77□□□□□ -0.05
TCOF1-201ENST00000323668 CCDC189A1A4V9 331 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 KCNH1O95259 989 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 SLC1A2P43004 574 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 MRPS6P82932 125 aaKnown RBP14.77□□□□□ -0.05
TCOF1-201ENST00000323668 PAOXQ6QHF9 649 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 STK40Q8N2I9 435 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 CPSF7Q8N684 471 aaKnown RBP14.77□□□□□ -0.05
TCOF1-201ENST00000323668 ARFGAP1Q8N6T3 406 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 TWIST2Q8WVJ9 160 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 ROPN1LQ96C74 230 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 TRPM5Q9NZQ8 1165 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 RBPJLQ9UBG7 517 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 GIT1Q9Y2X7 761 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 PHLPP1O60346 1717 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 SNNO75324 88 aaPredicted RBP14.77□□□□□ -0.05
TCOF1-201ENST00000323668 RECQL5O94762 991 aaPredicted RBP14.77□□□□□ -0.05
TCOF1-201ENST00000323668 CELF2O95319 508 aaKnown RBP14.77□□□□□ -0.05
TCOF1-201ENST00000323668 SLC7A1P30825 629 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 SLC10A2Q12908 348 aaPredicted RBP14.77□□□□□ -0.05
TCOF1-201ENST00000323668 MAPKAPK3Q16644 382 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 RAB6CQ53S08 254 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 IL23RQ5VWK5 629 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 MON1AQ86VX9 555 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 GIPC3Q8TF64 312 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 DNAJC1Q96KC8 554 aaKnown RBP14.77□□□□□ -0.05
TCOF1-201ENST00000323668 TBATAQ96M53 351 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 GLT1D1Q96MS3 346 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 RAB6CQ9H0N0 254 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 HPS4Q9NQG7 708 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 C3orf18Q9UK00 162 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 AP3M1Q9Y2T2 418 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 BCORQ6W2J9 1755 aa14.77□□□□□ -0.05
TCOF1-201ENST00000323668 H7C4K7 107 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 AHSGP02765 367 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 AKR1A1P14550 325 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 HTR7P34969 479 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 TTPAP49638 278 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 RUNX1T1Q06455 604 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 TXNDC11Q6PKC3 985 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 AFTPHQ6ULP2 937 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 SPESP1Q6UW49 350 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 CLEC20AQ6ZU45 233 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 CENPNQ96H22 339 aaPredicted RBP14.76□□□□□ -0.05
TCOF1-201ENST00000323668 FCRL5Q96RD9 977 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 KCNK13Q9HB14 408 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 OPTCQ9UBM4 332 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 RNASEH1O60930 286 aaKnown RBP14.76□□□□□ -0.05
TCOF1-201ENST00000323668 S100A3P33764 101 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 ARHGAP1Q07960 439 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 TSTD2Q5T7W7 516 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 FAM171A1Q5VUB5 890 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 CNSTQ6PJW8 725 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 CARNMT1Q8N4J0 409 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 RTP4Q96DX8 246 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 PKP2Q99959 881 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 KANSL3Q9P2N6 904 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 DOCK2Q92608 1830 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 C5orf58C9J3I9 102 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 ZSCAN9O15535 394 aaPredicted RBP14.76□□□□□ -0.05
TCOF1-201ENST00000323668 CKMT2P17540 419 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 HCAR3P49019 387 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 RABGGTBP53611 331 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 ZBTB46Q86UZ6 589 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 SEPT8Q92599 483 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 PDGFDQ9GZP0 370 aaPredicted RBP14.76□□□□□ -0.05
TCOF1-201ENST00000323668 C9JVG2 144 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 TREHO43280 583 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 HCRTO43612 131 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 PRIM2P49643 509 aa14.76□□□□□ -0.05
TCOF1-201ENST00000323668 TRAP1Q12931 704 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms