RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 BTBD8Q5XKL5 378 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 LARP4Q71RC2 724 aaKnown RBP eCLIP17.94■□□□□ 0.461e-6■■■■□ 21.3
PRKCB-202ENST00000321728 LINC00523Q86TU6 105 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 TMCO5AQ8N6Q1 288 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 TRPM4Q8TD43 1214 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 WNT8BQ93098 351 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 TAMM41Q96BW9 452 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 ZMAT2Q96NC0 199 aaKnown RBP17.94■□□□□ 0.46
PRKCB-202ENST00000321728 NPY6RQ99463 290 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 SMARCAD1Q9H4L7 1026 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 SPON1Q9HCB6 807 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 ACTR3BQ9P1U1 418 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 SLC2A6Q9UGQ3 507 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 ITGB1BP2Q9UKP3 347 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 IQCA1LA6NCM1 817 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 CLPXO76031 633 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 CPB1P15086 417 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 CHRM3P20309 590 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 GPX3P22352 226 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 JAK1P23458 1154 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 POLD2P49005 469 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 TMBIM6P55061 237 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 BNIP2Q12982 314 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 TECRLQ5HYJ1 363 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 LCN8Q6JVE9 175 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 GADL1Q6ZQY3 521 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 IGFN1Q86VF2 1251 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 IPMKQ8NFU5 416 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 C3orf30Q96M34 536 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 GLT1D1Q96MS3 346 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 RIC8BQ9NVN3 520 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 CMTM6Q9NX76 183 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 SEPT3Q9UH03 358 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 BBIP1A8MTZ0 92 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 AP3B1O00203 1094 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 AURKAO14965 403 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 SUPT7LO94864 414 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 C7P10643 843 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 HMGB2P26583 209 aaKnown RBP17.93■□□□□ 0.46
PRKCB-202ENST00000321728 ELK4P28324 431 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 RPL34P49207 117 aaKnown RBP17.93■□□□□ 0.46
PRKCB-202ENST00000321728 YBX1P67809 324 aaKnown RBP17.93■□□□□ 0.46
PRKCB-202ENST00000321728 RBM20Q5T481 1227 aaKnown RBP17.93■□□□□ 0.46
PRKCB-202ENST00000321728 AGAP9Q5VTM2 703 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 PRMT9Q6P2P2 845 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 CNTN4Q8IWV2 1026 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 ZC3H15Q8WU90 426 aaKnown RBP17.93■□□□□ 0.46
PRKCB-202ENST00000321728 C19orf60Q96EN9 201 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 CELF6Q96J87 481 aaKnown RBP17.93■□□□□ 0.46
PRKCB-202ENST00000321728 ABCD2Q9UBJ2 740 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 GIMAP2Q9UG22 337 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 DAPK2Q9UIK4 370 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 TSC22D4Q9Y3Q8 395 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 V9GYQ6 96 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 DOCK1Q14185 1865 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 UBFD1O14562 309 aaKnown RBP17.93■□□□□ 0.46
PRKCB-202ENST00000321728 MT-CYBP00156 380 aaPredicted RBP17.93■□□□□ 0.46
PRKCB-202ENST00000321728 FCGR1AP12314 374 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 HSD17B1P14061 328 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 GFAPP14136 432 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 KCNC4Q03721 635 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 ZNF618Q5T7W0 954 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 HFE2Q6ZVN8 426 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 PPHLN1Q8NEY8 458 aaKnown RBP17.93■□□□□ 0.46
PRKCB-202ENST00000321728 HDAC11Q96DB2 347 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 AKTIPQ9H8T0 292 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 NDUFAF1Q9Y375 327 aa17.93■□□□□ 0.46
PRKCB-202ENST00000321728 FAM32AQ9Y421 112 aaKnown RBP17.93■□□□□ 0.46
PRKCB-202ENST00000321728 KPNA4O00629 521 aaPredicted RBP17.92■□□□□ 0.46
PRKCB-202ENST00000321728 CAPN3P20807 821 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 ARNTP27540 789 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 TKTP29401 623 aaKnown RBP17.92■□□□□ 0.46
PRKCB-202ENST00000321728 GEN1Q17RS7 908 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 ZIK1Q3SY52 487 aaPredicted RBP17.92■□□□□ 0.46
PRKCB-202ENST00000321728 ZNF773Q6PK81 442 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 CYHR1Q6ZMK1 362 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 KDELC2Q7Z4H8 507 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 PNPT1Q8TCS8 783 aaKnown RBP17.92■□□□□ 0.46
PRKCB-202ENST00000321728 SNX19Q92543 992 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 NRBF2Q96F24 287 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 VAT1Q99536 393 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 TDRD1Q9BXT4 1180 aaKnown RBP17.92■□□□□ 0.46
PRKCB-202ENST00000321728 BRD8Q9H0E9 1235 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 ING2Q9H160 280 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 NANOGQ9H9S0 305 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 ATAD3AQ9NVI7 634 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 SNTG2Q9NY99 539 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 PSME2Q9UL46 239 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 RAD54BQ9Y620 910 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 KRBA1A5PL33 1030 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 TSPAN1O60635 241 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 CPNE6O95741 557 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 GPIP06744 558 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 MBL2P11226 248 aaPredicted RBP17.92■□□□□ 0.46
PRKCB-202ENST00000321728 INSRRP14616 1297 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 NCK1P16333 377 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 RFC2P35250 354 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 IREB2P48200 963 aaKnown RBP17.92■□□□□ 0.46
PRKCB-202ENST00000321728 ARCN1P48444 511 aaKnown RBP17.92■□□□□ 0.46
PRKCB-202ENST00000321728 KPNA1P52294 538 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms