RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 HNRNPABQ99729 332 aaKnown RBP16.52■□□□□ 0.24
CLIP4-201ENST00000320081 TRIM8Q9BZR9 551 aa16.52■□□□□ 0.24
CLIP4-201ENST00000320081 SYNDIG1Q9H7V2 258 aa16.52■□□□□ 0.24
CLIP4-201ENST00000320081 EVLQ9UI08 416 aaPredicted RBP16.52■□□□□ 0.24
CLIP4-201ENST00000320081 ANAPC2Q9UJX6 822 aa16.52■□□□□ 0.24
CLIP4-201ENST00000320081 POMPQ9Y244 141 aa16.52■□□□□ 0.24
CLIP4-201ENST00000320081 PTCH2Q9Y6C5 1203 aa16.52■□□□□ 0.24
CLIP4-201ENST00000320081 LOC100506127A0A0U1RQW1 187 aa16.52■□□□□ 0.24
CLIP4-201ENST00000320081 ULK1O75385 1050 aa16.52■□□□□ 0.24
CLIP4-201ENST00000320081 IPO13O94829 963 aaKnown RBP16.52■□□□□ 0.24
CLIP4-201ENST00000320081 ATG7O95352 703 aa16.52■□□□□ 0.24
CLIP4-201ENST00000320081 ZNF37AP17032 561 aaPredicted RBP16.52■□□□□ 0.24
CLIP4-201ENST00000320081 ITPKAP23677 461 aa16.52■□□□□ 0.24
CLIP4-201ENST00000320081 GPR107Q5VW38 600 aa16.52■□□□□ 0.24
CLIP4-201ENST00000320081 OSTM1Q86WC4 334 aa16.52■□□□□ 0.24
CLIP4-201ENST00000320081 ZNF276Q8N554 614 aa16.52■□□□□ 0.24
CLIP4-201ENST00000320081 PQLC3Q8N755 202 aa16.52■□□□□ 0.24
CLIP4-201ENST00000320081 C7orf26Q96N11 449 aa16.52■□□□□ 0.24
CLIP4-201ENST00000320081 PHF12Q96QT6 1004 aa16.52■□□□□ 0.24
CLIP4-201ENST00000320081 ATG10Q9H0Y0 220 aa16.52■□□□□ 0.24
CLIP4-201ENST00000320081 KCTD3Q9Y597 815 aa16.52■□□□□ 0.24
CLIP4-201ENST00000320081 KDM3BQ7LBC6 1761 aa16.52■□□□□ 0.23
CLIP4-201ENST00000320081 FAM72CH0Y354 149 aa16.52■□□□□ 0.23
CLIP4-201ENST00000320081 BEST1O76090 585 aa16.52■□□□□ 0.23
CLIP4-201ENST00000320081 TOMM70O94826 608 aa16.52■□□□□ 0.23
CLIP4-201ENST00000320081 MSH3P20585 1137 aa16.52■□□□□ 0.23
CLIP4-201ENST00000320081 GPR15P49685 360 aa16.52■□□□□ 0.23
CLIP4-201ENST00000320081 CREB5Q02930 508 aa16.52■□□□□ 0.23
CLIP4-201ENST00000320081 SLC10A7Q0GE19 358 aa16.52■□□□□ 0.23
CLIP4-201ENST00000320081 TSNQ15631 228 aaKnown RBP16.52■□□□□ 0.23
CLIP4-201ENST00000320081 FAM72AQ5TYM5 149 aa16.52■□□□□ 0.23
CLIP4-201ENST00000320081 ARMC3Q5W041 872 aa16.52■□□□□ 0.23
CLIP4-201ENST00000320081 FAM72DQ6L9T8 149 aa16.52■□□□□ 0.23
CLIP4-201ENST00000320081 FAM72BQ86X60 149 aa16.52■□□□□ 0.23
CLIP4-201ENST00000320081 SYT12Q8IV01 421 aa16.52■□□□□ 0.23
CLIP4-201ENST00000320081 ZC3H15Q8WU90 426 aaKnown RBP16.52■□□□□ 0.23
CLIP4-201ENST00000320081 CRYGNQ8WXF5 182 aa16.52■□□□□ 0.23
CLIP4-201ENST00000320081 TMEM39AQ9NV64 488 aa16.52■□□□□ 0.23
CLIP4-201ENST00000320081 GNEQ9Y223 722 aaKnown RBP16.52■□□□□ 0.23
CLIP4-201ENST00000320081 A0A087X1B8 175 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 DHRS12A0PJE2 317 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 NBNO60934 754 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 CYP7B1O75881 506 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 APOA1P02647 267 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 SLC1A2P43004 574 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 RAD23AP54725 363 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 ELAVL2Q12926 359 aaKnown RBP16.51■□□□□ 0.23
CLIP4-201ENST00000320081 DRICH1Q6PGQ1 229 aaPredicted RBP16.51■□□□□ 0.23
CLIP4-201ENST00000320081 DCLRE1AQ6PJP8 1040 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 C6orf89Q6UWU4 347 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 HERC6Q8IVU3 1022 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 PLD6Q8N2A8 252 aaKnown RBP16.51■□□□□ 0.23
CLIP4-201ENST00000320081 ZNF778Q96MU6 729 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 CDK15Q96Q40 435 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 R3HDMLQ9H3Y0 253 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 MRGBPQ9NV56 204 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 DNMT3LQ9UJW3 386 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 TP73O15350 636 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 VCLP18206 1134 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 TKTP29401 623 aaKnown RBP16.51■□□□□ 0.23
CLIP4-201ENST00000320081 SERPINB10P48595 397 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 TUFMP49411 452 aaKnown RBP16.51■□□□□ 0.23
CLIP4-201ENST00000320081 TMED10P49755 219 aaKnown RBP16.51■□□□□ 0.23
CLIP4-201ENST00000320081 PERM1Q5SV97 790 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 PIM3Q86V86 326 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 TDRPQ86YL5 185 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 RASAL3Q86YV0 1011 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 ZC3H3Q8IXZ2 948 aaKnown RBP16.51■□□□□ 0.23
CLIP4-201ENST00000320081 POLR3HQ9Y535 204 aaPredicted RBP16.51■□□□□ 0.23
CLIP4-201ENST00000320081 PTPRZ1P23471 2315 aaPredicted RBP16.51■□□□□ 0.23
CLIP4-201ENST00000320081 RGPD1P0DJD0 1748 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 SPEF2Q9C093 1822 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 LYNP07948 512 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 BLVRAP53004 296 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 MSLNQ13421 630 aaPredicted RBP16.51■□□□□ 0.23
CLIP4-201ENST00000320081 RIPK1Q13546 671 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 FGD3Q5JSP0 725 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 ZFP1Q6P2D0 407 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 CLYBLQ8N0X4 340 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 NPLOC4Q8TAT6 608 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 FEM1CQ96JP0 617 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 C6orf62Q9GZU0 229 aaPredicted RBP16.51■□□□□ 0.23
CLIP4-201ENST00000320081 GBA3Q9H227 469 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 FZD10Q9ULW2 581 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 ARL5AQ9Y689 179 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 TEX264Q9Y6I9 313 aa16.51■□□□□ 0.23
CLIP4-201ENST00000320081 A0A0G2JLL6 359 aaPredicted RBP16.5■□□□□ 0.23
CLIP4-201ENST00000320081 CCDC189A1A4V9 331 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 TMEM114B3SHH9 223 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 TRIM38O00635 465 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 ZBTB14O43829 449 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 RTN3O95197 1032 aaPredicted RBP16.5■□□□□ 0.23
CLIP4-201ENST00000320081 LPOP22079 712 aaPredicted RBP16.5■□□□□ 0.23
CLIP4-201ENST00000320081 CASP9P55211 416 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 PRKG2Q13237 762 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 DPYSL2Q16555 572 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 PRRT2Q7Z6L0 340 aaPredicted RBP16.5■□□□□ 0.23
CLIP4-201ENST00000320081 RBM23Q86U06 439 aaKnown RBP16.5■□□□□ 0.23
CLIP4-201ENST00000320081 ELMO1Q92556 727 aa16.5■□□□□ 0.23
CLIP4-201ENST00000320081 TEKT5Q96M29 485 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms