RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 ERLEC1Q96DZ1 483 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 CDH19Q9H159 772 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 XPR1Q9UBH6 696 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 DSEQ9UL01 958 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 PRPF19Q9UMS4 504 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 AAR2Q9Y312 384 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 ACOT8O14734 319 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 TIMM44O43615 452 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 STAMBPO95630 424 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 ALDH2P05091 517 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 TSPAN8P19075 237 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 HOXD12P35452 270 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 HALP42357 657 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 TBX4P57082 545 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 VARS2Q5ST30 1063 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 PKN3Q6P5Z2 889 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 CNSTQ6PJW8 725 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 CARM1Q86X55 608 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 TMEM126BQ8IUX1 230 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 ABI1Q8IZP0 508 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 PPHLN1Q8NEY8 458 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 PDCD6IPQ8WUM4 868 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 LRTOMTQ8WZ04 291 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 EXT2Q93063 718 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 C12orf43Q96C57 262 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 ABHD8Q96I13 439 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 VAT1Q99536 393 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 TMEM79Q9BSE2 394 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 HAUS8Q9BT25 410 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 RMI1Q9H9A7 625 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 KCTD3Q9Y597 815 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 FUOMA2VDF0 154 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 ERI2A8K979 691 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 FAM155AB1AL88 458 aaPredicted RBP15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 FBP2O00757 339 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 MATN3O15232 486 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 TRIM13O60858 407 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 PIGNO95427 931 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 JUNP05412 331 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 ACLYP53396 1101 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 TXNL4AP83876 142 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 CD300CQ08708 224 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 SREBF2Q12772 1141 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 CBLBQ13191 982 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 CSHL1Q14406 222 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 MAPRE1Q15691 268 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 RBM20Q5T481 1227 aaKnown RBP15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 FSTL5Q8N475 847 aaPredicted RBP15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 ISOC1Q96CN7 298 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 RPRD1AQ96P16 312 aaPredicted RBP15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 SERPINI1Q99574 410 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 OSBPL2Q9H1P3 480 aa15.61■□□□□ 0.09
SHROOM1-201ENST00000319854 TSC2P49815 1807 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 TRPM7Q96QT4 1865 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 FAM95CA0A1B0GW59 222 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 RGSL1A5PLK6 1076 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 TMEM247A6NEH6 219 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 ATE1O95260 518 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 CYP11A1P05108 521 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 HNRNPLP14866 589 aaKnown RBP eCLIP15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 CCNCP24863 283 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 GRK2P25098 689 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 IKBKEQ14164 716 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 ANO4Q32M45 955 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 ARL13AQ5H913 290 aaPredicted RBP15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 PCID2Q5JVF3 399 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 STXBP5Q5T5C0 1151 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 DENND5AQ6IQ26 1287 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 XKR5Q6UX68 686 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 RYBPQ8N488 228 aaPredicted RBP15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 SNX31Q8N9S9 440 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 FBXO32Q969P5 355 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 GLT1D1Q96MS3 346 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 GPR62Q9BZJ7 368 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 SMOC2Q9H3U7 446 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 SP110Q9HB58 689 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 TCF7L2Q9NQB0 619 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 SLC12A8A0AV02 714 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 ANXA9O76027 345 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 SLC35E2BP0CK96 405 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 CD247P20963 164 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 ARNTP27540 789 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 SLC12A2P55011 1212 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 TAS2R39P59534 338 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 CCDC153Q494R4 210 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 ZNF362Q5T0B9 420 aaPredicted RBP15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 LINC00523Q86TU6 105 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 LINC01599Q8WXQ3 324 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 MYEOVQ96EZ4 313 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 MRGPRX2Q96LB1 330 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 PCDHAC1Q9H158 963 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 PRDM16Q9HAZ2 1276 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 COQ6Q9Y2Z9 468 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 CDH23Q9H251 3354 aa15.6■□□□□ 0.09
SHROOM1-201ENST00000319854 BCAS2O75934 225 aaPredicted RBP15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 HSPA13P48723 471 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 CLCN2P51788 898 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 TAF10Q12962 218 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 IRF5Q13568 498 aa15.59■□□□□ 0.09
SHROOM1-201ENST00000319854 LSM12Q3MHD2 195 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms