RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 MTERF3Q96E29 417 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 SIGLEC10Q96LC7 697 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 TMEM74Q96NL1 305 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 ACOX2Q99424 681 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 PTPN18Q99952 460 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 RNF38Q9H0F5 515 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 EHD1Q9H4M9 534 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 FAIMQ9NVQ4 179 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 SMPD3Q9NY59 655 aaPredicted RBP7.56□□□□□ -1.2
CDHR3-201ENST00000317716 EHD3Q9NZN3 535 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 MORF4L1Q9UBU8 362 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 MTF2Q9Y483 593 aaPredicted RBP7.56□□□□□ -1.2
CDHR3-201ENST00000317716 HTR3EA5X5Y0 456 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 MOXD2PA6NHM9 499 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 MANSC4A6NHS7 340 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-201ENST00000317716 H3BNX3 289 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 SOCS2O14508 198 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 CABYRO75952 493 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 SNAP29O95721 258 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 ATP5BP06576 529 aaKnown RBP7.55□□□□□ -1.2
CDHR3-201ENST00000317716 HK2P52789 917 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 ATN1P54259 1190 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-201ENST00000317716 FPGSQ05932 587 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 CDH17Q12864 832 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 MXD4Q14582 209 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-201ENST00000317716 RABL3Q5HYI8 236 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 COLEC12Q5KU26 742 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 NEPROQ6NW34 567 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 SLC22A16Q86VW1 577 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 TTC30AQ86WT1 665 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 RASAL3Q86YV0 1011 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 FIBCD1Q8N539 461 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 ZNF540Q8NDQ6 660 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 APPL2Q8NEU8 664 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 CLHC1Q8NHS4 586 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 UNC93B1Q9H1C4 597 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 C1orf21Q9H246 121 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 DHX33Q9H6R0 707 aaKnown RBP7.55□□□□□ -1.2
CDHR3-201ENST00000317716 SNTG2Q9NY99 539 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 DTLQ9NZJ0 730 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 SATB2Q9UPW6 733 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 TRAF6Q9Y4K3 522 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 PTGDR2Q9Y5Y4 395 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 UBIAD1Q9Y5Z9 338 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 SQORQ9Y6N5 450 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 KLF11O14901 512 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 H2AFYO75367 372 aaKnown RBP7.55□□□□□ -1.2
CDHR3-201ENST00000317716 NDUFS3O75489 264 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 ATE1O95260 518 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 CCT8P50990 548 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 TNFAIP2Q03169 654 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 PMS2P3Q13401 168 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 DPYSQ14117 519 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 GCNT7Q6ZNI0 430 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 PSTKQ8IV42 348 aaKnown RBP7.55□□□□□ -1.2
CDHR3-201ENST00000317716 TP53INP2Q8IXH6 220 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 ABI1Q8IZP0 508 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 ZNF567Q8N184 647 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 CDYL2Q8N8U2 506 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 APBB2Q92870 758 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 MTFMTQ96DP5 389 aaKnown RBP7.55□□□□□ -1.2
CDHR3-201ENST00000317716 KCTD15Q96SI1 283 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-201ENST00000317716 TSEN34Q9BSV6 310 aaKnown RBP7.55□□□□□ -1.2
CDHR3-201ENST00000317716 HIPK3Q9H422 1215 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 ZFP14Q9HCL3 533 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 LATS2Q9NRM7 1088 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 CPSF3Q9UKF6 684 aaKnown RBP7.55□□□□□ -1.2
CDHR3-201ENST00000317716 GMEB1Q9Y692 573 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 SLC30A1Q9Y6M5 507 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 C7orf72A4D263 438 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 FFAR3O14843 346 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 GPR42O15529 346 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 SIX3O95343 332 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-201ENST00000317716 CST1P01037 141 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 JUNP05412 331 aaKnown RBP7.55□□□□□ -1.2
CDHR3-201ENST00000317716 TSHRP16473 764 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 ZNF12P17014 697 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 PRKACGP22612 351 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 S100A1P23297 94 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 ATP5F1P24539 256 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-201ENST00000317716 IL12AP29459 219 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 RCVRNP35243 200 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 NR4A2P43354 598 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 TKTL1P51854 596 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 TAS2R39P59534 338 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 SQLEQ14534 574 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 TRIP4Q15650 581 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-201ENST00000317716 CCL14Q16627 93 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 IER5Q5VY09 327 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 ESRP1Q6NXG1 681 aaKnown RBP7.55□□□□□ -1.2
CDHR3-201ENST00000317716 CTU1Q7Z7A3 348 aaKnown RBP7.55□□□□□ -1.2
CDHR3-201ENST00000317716 RELL1Q8IUW5 271 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 SLC44A2Q8IWA5 706 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-201ENST00000317716 SEPT8Q92599 483 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 GPRASP2Q96D09 838 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 RBBP8Q99708 897 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 PDGFCQ9NRA1 345 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 RGS18Q9NS28 235 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 SMOXQ9NWM0 555 aa7.55□□□□□ -1.2
CDHR3-201ENST00000317716 DDX43Q9NXZ2 648 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms