RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 TMEM198Q66K66 360 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 ATG16L1Q676U5 607 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 SMYD5Q6GMV2 418 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 MSANTD2Q6P1R3 559 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 PKN3Q6P5Z2 889 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 MARK2Q7KZI7 788 aaKnown RBP7.65□□□□□ -1.19
TRIM55-202ENST00000315962 RYBPQ8N488 228 aaPredicted RBP7.65□□□□□ -1.19
TRIM55-202ENST00000315962 LZTR1Q8N653 840 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 EFHBQ8N7U6 833 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 MAPK15Q8TD08 544 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 DDI1Q8WTU0 396 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 KCTD4Q8WVF5 259 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 SNRNP27Q8WVK2 155 aaKnown RBP7.65□□□□□ -1.19
TRIM55-202ENST00000315962 SPATA17Q96L03 361 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 TBATAQ96M53 351 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 TSGA13Q96PP4 275 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 TMEM175Q9BSA9 504 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 ABCG8Q9H221 673 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 FAM96AQ9H5X1 160 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 LIN28AQ9H9Z2 209 aaKnown RBP7.65□□□□□ -1.19
TRIM55-202ENST00000315962 PREBQ9HCU5 417 aa7.65□□□□□ -1.19
TRIM55-202ENST00000315962 SSU72Q9NP77 194 aaKnown RBP7.65□□□□□ -1.19
TRIM55-202ENST00000315962 MARCH4Q9P2E8 410 aaPredicted RBP7.65□□□□□ -1.19
TRIM55-202ENST00000315962 AFF4Q9UHB7 1163 aaKnown RBP7.65□□□□□ -1.19
TRIM55-202ENST00000315962 WDR87Q6ZQQ6 2873 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 TRIM24O15164 1050 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 HNRNPCL1O60812 293 aaKnown RBP7.64□□□□□ -1.19
TRIM55-202ENST00000315962 ABLIM3O94929 683 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 TGDSO95455 350 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 TSPAN8P19075 237 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 HOXC13P31276 330 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 GJA8P48165 433 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 CDKN1CP49918 316 aaPredicted RBP7.64□□□□□ -1.19
TRIM55-202ENST00000315962 COPAP53621 1224 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 NTHL1P78549 312 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 TBL3Q12788 808 aaKnown RBP7.64□□□□□ -1.19
TRIM55-202ENST00000315962 HNRNPDQ14103 355 aaKnown RBP7.64□□□□□ -1.19
TRIM55-202ENST00000315962 VEPH1Q14D04 833 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 SPDYAQ5MJ70 313 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 STEAP4Q687X5 459 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 PDPK2PQ6A1A2 396 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 PIM3Q86V86 326 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 ST13P4Q8IZP2 240 aaPredicted RBP7.64□□□□□ -1.19
TRIM55-202ENST00000315962 ARRDC2Q8TBH0 407 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 EXT2Q93063 718 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 ELMO2Q96JJ3 720 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 SCYL1Q96KG9 808 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 TOX2Q96NM4 488 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 TCF25Q9BQ70 676 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 APOL5Q9BWW9 433 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 KLHL4Q9C0H6 718 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 CRISPLD2Q9H0B8 497 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 TASP1Q9H6P5 420 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 SIRPGQ9P1W8 387 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 FETUBQ9UGM5 382 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 CDH22Q9UJ99 828 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 ZNF180Q9UJW8 692 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 APOBEC2Q9Y235 224 aaKnown RBP7.64□□□□□ -1.19
TRIM55-202ENST00000315962 POMPQ9Y244 141 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 INSL5Q9Y5Q6 135 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 NLRC5Q86WI3 1866 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 C15orf38-AP3S2A0A0A6YYH1 394 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.64□□□□□ -1.19
TRIM55-202ENST00000315962 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.64□□□□□ -1.19
TRIM55-202ENST00000315962 MAGEC1O60732 1142 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 ARHGEF15O94989 841 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 GSRP00390 522 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 ZDHHC11BP0C7U3 371 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 FGF3P11487 239 aaPredicted RBP7.64□□□□□ -1.19
TRIM55-202ENST00000315962 VCLP18206 1134 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 DNAJB1P25685 340 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 NUDT2P50583 147 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 ZNF177Q13360 481 aaPredicted RBP7.64□□□□□ -1.19
TRIM55-202ENST00000315962 TUBB3Q13509 450 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 PDK3Q15120 406 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 SLC9B1Q4ZJI4 515 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 PCID2Q5JVF3 399 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 SPANXN3Q5MJ09 141 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 C6orf52Q5T4I8 152 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 FAM109BQ6ICB4 259 aaPredicted RBP7.64□□□□□ -1.19
TRIM55-202ENST00000315962 TIGD7Q6NT04 549 aaPredicted RBP7.64□□□□□ -1.19
TRIM55-202ENST00000315962 NAPRTQ6XQN6 538 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 RBM44Q6ZP01 1051 aaKnown RBP7.64□□□□□ -1.19
TRIM55-202ENST00000315962 BEND5Q7L4P6 421 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 ARPINQ7Z6K5 226 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 PDSS2Q86YH6 399 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 ZNF781Q8N8C0 355 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 PPHLN1Q8NEY8 458 aaKnown RBP7.64□□□□□ -1.19
TRIM55-202ENST00000315962 ABTB1Q969K4 478 aaPredicted RBP7.64□□□□□ -1.19
TRIM55-202ENST00000315962 ZNF689Q96CS4 500 aaPredicted RBP7.64□□□□□ -1.19
TRIM55-202ENST00000315962 TCEAL4Q96EI5 215 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 IMP4Q96G21 291 aaKnown RBP7.64□□□□□ -1.19
TRIM55-202ENST00000315962 TRAPPC9Q96Q05 1148 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 OR52B2Q96RD2 323 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 RBBP8Q99708 897 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 CYP4F12Q9HCS2 524 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 OLA1Q9NTK5 396 aaKnown RBP7.64□□□□□ -1.19
TRIM55-202ENST00000315962 PDP2Q9P2J9 529 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 VPS28Q9UK41 221 aa7.64□□□□□ -1.19
TRIM55-202ENST00000315962 IGLV3-10A0A075B6K4 115 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms