RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 ANKRD66B4E2M5 251 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 PRSS56P0CW18 603 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 CCDC166P0CW27 439 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 ESRRAP11474 423 aaPredicted RBP18.4■□□□□ 0.54
CCDC43-201ENST00000315286 MYL4P12829 197 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 CALB2P22676 271 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 PRKAA2P54646 552 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 TAF1AQ15573 450 aaPredicted RBP18.4■□□□□ 0.54
CCDC43-201ENST00000315286 SNCBQ16143 134 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 FAM83EQ2M2I3 478 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 TMEM207Q6UWW9 146 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 LONP2Q86WA8 852 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 MFN1Q8IWA4 741 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 TDRD5Q8NAT2 981 aaKnown RBP18.4■□□□□ 0.54
CCDC43-201ENST00000315286 AGR3Q8TD06 166 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 PDCD6IPQ8WUM4 868 aaKnown RBP18.4■□□□□ 0.54
CCDC43-201ENST00000315286 UBXN10Q96LJ8 280 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 MIPEPQ99797 713 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 CORO1BQ9BR76 489 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 CCDC106Q9BWC9 280 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 CDH19Q9H159 772 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 PLK2Q9NYY3 685 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 BAIAP2L1Q9UHR4 511 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 APOBEC2Q9Y235 224 aaKnown RBP18.4■□□□□ 0.54
CCDC43-201ENST00000315286 MTF2Q9Y483 593 aaPredicted RBP18.4■□□□□ 0.54
CCDC43-201ENST00000315286 MYO7AQ13402 2215 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 HIDE1A8MVS5 230 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 K7ERQ8 282 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 CCL16O15467 120 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 SLC4A1P02730 911 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 LTA4HP09960 611 aaKnown RBP18.4■□□□□ 0.54
CCDC43-201ENST00000315286 RHOAP61586 193 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 RIPK1Q13546 671 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 UBAP2LQ14157 1087 aaKnown RBP18.4■□□□□ 0.54
CCDC43-201ENST00000315286 PTPRRQ15256 657 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 ARL13AQ5H913 290 aaPredicted RBP18.4■□□□□ 0.54
CCDC43-201ENST00000315286 BADQ92934 168 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 SLC46A2Q9BY10 475 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 ILKAPQ9H0C8 392 aaPredicted RBP18.4■□□□□ 0.54
CCDC43-201ENST00000315286 SMG9Q9H0W8 520 aaKnown RBP18.4■□□□□ 0.54
CCDC43-201ENST00000315286 FAM96AQ9H5X1 160 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 COG4Q9H9E3 785 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 CLEC4EQ9ULY5 219 aa18.4■□□□□ 0.54
CCDC43-201ENST00000315286 TRAV19A0A0A6YYK7 116 aa18.39■□□□□ 0.53
CCDC43-201ENST00000315286 LCHNA4D1U4 455 aa18.39■□□□□ 0.53
CCDC43-201ENST00000315286 WISP3O95389 354 aaPredicted RBP18.39■□□□□ 0.53
CCDC43-201ENST00000315286 ABL2P42684 1182 aa18.39■□□□□ 0.53
CCDC43-201ENST00000315286 KPNA2P52292 529 aaKnown RBP18.39■□□□□ 0.53
CCDC43-201ENST00000315286 RCN2Q14257 317 aa18.39■□□□□ 0.53
CCDC43-201ENST00000315286 TECRLQ5HYJ1 363 aa18.39■□□□□ 0.53
CCDC43-201ENST00000315286 ATXN7L2Q5T6C5 722 aaPredicted RBP18.39■□□□□ 0.53
CCDC43-201ENST00000315286 AGAP9Q5VTM2 703 aa18.39■□□□□ 0.53
CCDC43-201ENST00000315286 FAM45BPQ6NSW5 357 aa18.39■□□□□ 0.53
CCDC43-201ENST00000315286 RINLQ6ZS11 566 aa18.39■□□□□ 0.53
CCDC43-201ENST00000315286 TPGS1Q6ZTW0 290 aa18.39■□□□□ 0.53
CCDC43-201ENST00000315286 PIM3Q86V86 326 aa18.39■□□□□ 0.53
CCDC43-201ENST00000315286 ELMOD1Q8N336 334 aa18.39■□□□□ 0.53
CCDC43-201ENST00000315286 DCAF4L2Q8NA75 395 aa18.39■□□□□ 0.53
CCDC43-201ENST00000315286 TXNDC5Q8NBS9 432 aaKnown RBP18.39■□□□□ 0.53
CCDC43-201ENST00000315286 FAM45AQ8TCE6 357 aa18.39■□□□□ 0.53
CCDC43-201ENST00000315286 BTBD10Q9BSF8 475 aa18.39■□□□□ 0.53
CCDC43-201ENST00000315286 ADGRE3Q9BY15 652 aa18.39■□□□□ 0.53
CCDC43-201ENST00000315286 TLE6Q9H808 572 aa18.39■□□□□ 0.53
CCDC43-201ENST00000315286 NEMP2A6NFY4 417 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 C2orf81A6NN90 581 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 DIAPH2O60879 1101 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 PIGNO95427 931 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 ENO1P06733 434 aaKnown RBP18.38■□□□□ 0.53
CCDC43-201ENST00000315286 OGNP20774 298 aaKnown RBP18.38■□□□□ 0.53
CCDC43-201ENST00000315286 MPSTP25325 297 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 CDC25CP30307 473 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 STC1P52823 247 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 TIAL1Q01085 375 aaKnown RBP eCLIP18.38■□□□□ 0.53
CCDC43-201ENST00000315286 SDCCAG8Q86SQ7 713 aaPredicted RBP18.38■□□□□ 0.53
CCDC43-201ENST00000315286 CPXM2Q8N436 756 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 SCG3Q8WXD2 468 aaKnown RBP18.38■□□□□ 0.53
CCDC43-201ENST00000315286 TMEM106CQ9BVX2 250 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 HCFC1R1Q9NWW0 138 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 RAP2CQ9Y3L5 183 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 MTCL1Q9Y4B5 1905 aaKnown RBP18.38■□□□□ 0.53
CCDC43-201ENST00000315286 LAMA3Q16787 3333 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 MYOFQ9NZM1 2061 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 PRR5-ARHGAP8B1AHC4 643 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 LEFTY2O00292 366 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 GLUD1P00367 558 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 HSPA8P11142 646 aaKnown RBP18.38■□□□□ 0.53
CCDC43-201ENST00000315286 PSMA3P25788 255 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 PMLP29590 882 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 CCR2P41597 374 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 ARHGAP8P85298 464 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 PPIGQ13427 754 aaKnown RBP eCLIP18.38■□□□□ 0.53
CCDC43-201ENST00000315286 TYSND1Q2T9J0 566 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 GPR158Q5T848 1215 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 EPGNQ6UW88 154 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 LSMEM2Q8N112 164 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 EFHBQ8N7U6 833 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 MAPK15Q8TD08 544 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 EMILIN2Q9BXX0 1053 aa18.38■□□□□ 0.53
CCDC43-201ENST00000315286 CADM1Q9BY67 442 aaKnown RBP18.38■□□□□ 0.53
CCDC43-201ENST00000315286 ASAH2Q9NR71 780 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms