RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 PPP4R1Q8TF05 950 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 NUMBLQ9Y6R0 609 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 TARM1B6A8C7 271 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 SMAD6O43541 496 aaKnown RBP21.31■■□□□ 1
ATG4D-201ENST00000309469 FZD6O60353 706 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 H2AFYO75367 372 aaKnown RBP21.31■■□□□ 1
ATG4D-201ENST00000309469 OGNP20774 298 aaKnown RBP21.31■■□□□ 1
ATG4D-201ENST00000309469 LPOP22079 712 aaPredicted RBP21.31■■□□□ 1
ATG4D-201ENST00000309469 SERPINB3P29508 390 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 ARRB2P32121 409 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 ABL2P42684 1182 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 PLK1P53350 603 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 AQP5P55064 265 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 SEMA3AQ14563 771 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 PLEKHG6Q3KR16 790 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 CLNKQ7Z7G1 428 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 TTC8Q8TAM2 541 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 USP13Q92995 863 aaPredicted RBP21.31■■□□□ 1
ATG4D-201ENST00000309469 SKA1Q96BD8 255 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 SORT1Q99523 831 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 SIKE1Q9BRV8 207 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 TXLNGQ9NUQ3 528 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 ABCB8Q9NUT2 735 aa21.31■■□□□ 1
ATG4D-201ENST00000309469 BPTFQ12830 3046 aa21.3■■□□□ 1
ATG4D-201ENST00000309469 CFAP73A6NFT4 308 aa21.3■■□□□ 1
ATG4D-201ENST00000309469 RASSF9O75901 435 aa21.3■■□□□ 1
ATG4D-201ENST00000309469 ATP5HO75947 161 aa21.3■■□□□ 1
ATG4D-201ENST00000309469 UNC5CO95185 931 aa21.3■■□□□ 1
ATG4D-201ENST00000309469 HNRNPA1P09651 372 aaKnown RBP eCLIP21.3■■□□□ 1
ATG4D-201ENST00000309469 ZBTB16Q05516 673 aa21.3■■□□□ 1
ATG4D-201ENST00000309469 SLC5A9Q2M3M2 681 aa21.3■■□□□ 1
ATG4D-201ENST00000309469 NAPRTQ6XQN6 538 aa21.3■■□□□ 1
ATG4D-201ENST00000309469 WDR75Q8IWA0 830 aaKnown RBP21.3■■□□□ 1
ATG4D-201ENST00000309469 LEMD2Q8NC56 503 aa21.3■■□□□ 1
ATG4D-201ENST00000309469 RIN3Q8TB24 985 aa21.3■■□□□ 1
ATG4D-201ENST00000309469 HEXDCQ8WVB3 486 aa21.3■■□□□ 1
ATG4D-201ENST00000309469 TM6SF2Q9BZW4 377 aa21.3■■□□□ 1
ATG4D-201ENST00000309469 IGSF5Q9NSI5 407 aa21.3■■□□□ 1
ATG4D-201ENST00000309469 TDP1Q9NUW8 608 aa21.3■■□□□ 1
ATG4D-201ENST00000309469 INTS6Q9UL03 887 aaKnown RBP21.3■■□□□ 1
ATG4D-201ENST00000309469 CRYL1Q9Y2S2 319 aa21.3■■□□□ 1
ATG4D-201ENST00000309469 PCDHB9Q9Y5E1 797 aa21.3■■□□□ 1
ATG4D-201ENST00000309469 SOBPA7XYQ1 873 aa21.29■■□□□ 1
ATG4D-201ENST00000309469 TMEM114B3SHH9 223 aa21.29■■□□□ 1
ATG4D-201ENST00000309469 XYLBO75191 536 aa21.29■■□□□ 1
ATG4D-201ENST00000309469 KPNA2P52292 529 aaKnown RBP21.29■■□□□ 1
ATG4D-201ENST00000309469 PRKAA2P54646 552 aa21.29■■□□□ 1
ATG4D-201ENST00000309469 FAM45BPQ6NSW5 357 aa21.29■■□□□ 1
ATG4D-201ENST00000309469 AFTPHQ6ULP2 937 aa21.29■■□□□ 1
ATG4D-201ENST00000309469 EFHBQ8N7U6 833 aa21.29■■□□□ 1
ATG4D-201ENST00000309469 FAM45AQ8TCE6 357 aa21.29■■□□□ 1
ATG4D-201ENST00000309469 LMLNQ96KR4 655 aa21.29■■□□□ 1
ATG4D-201ENST00000309469 GATA5Q9BWX5 397 aaPredicted RBP21.29■■□□□ 1
ATG4D-201ENST00000309469 WWP1Q9H0M0 922 aa21.29■■□□□ 1
ATG4D-201ENST00000309469 GPAMQ9HCL2 828 aa21.29■■□□□ 1
ATG4D-201ENST00000309469 XPR1Q9UBH6 696 aa21.29■■□□□ 1
ATG4D-201ENST00000309469 CORO1CQ9ULV4 474 aaPredicted RBP21.29■■□□□ 1
ATG4D-201ENST00000309469 CDKN2DP55273 166 aa21.29■■□□□ 1
ATG4D-201ENST00000309469 FAM83EQ2M2I3 478 aa21.29■■□□□ 1
ATG4D-201ENST00000309469 TYSND1Q2T9J0 566 aa21.29■■□□□ 1
ATG4D-201ENST00000309469 LIPMQ5VYY2 423 aa21.29■■□□□ 1
ATG4D-201ENST00000309469 METTL3Q86U44 580 aaKnown RBP21.29■■□□□ 1
ATG4D-201ENST00000309469 TMEM25Q86YD3 366 aa21.29■■□□□ 1
ATG4D-201ENST00000309469 SCG3Q8WXD2 468 aaKnown RBP21.29■■□□□ 1
ATG4D-201ENST00000309469 MRPL57Q9BQC6 102 aaKnown RBP21.29■■□□□ 1
ATG4D-201ENST00000309469 LBHD1Q9BQE6 289 aaPredicted RBP21.29■■□□□ 1
ATG4D-201ENST00000309469 MRPL46Q9H2W6 279 aaKnown RBP21.29■■□□□ 1
ATG4D-201ENST00000309469 HACD3Q9P035 362 aa21.29■■□□□ 1
ATG4D-201ENST00000309469 SLC4A1P02730 911 aa21.28■■□□□ 1
ATG4D-201ENST00000309469 PMLP29590 882 aa21.28■■□□□ 1
ATG4D-201ENST00000309469 CSNK1DP48730 415 aa21.28■■□□□ 1
ATG4D-201ENST00000309469 STC1P52823 247 aa21.28■■□□□ 1
ATG4D-201ENST00000309469 EPHB1P54762 984 aa21.28■■□□□ 1
ATG4D-201ENST00000309469 NTHL1P78549 312 aa21.28■■□□□ 1
ATG4D-201ENST00000309469 CSHL1Q14406 222 aa21.28■■□□□ 1
ATG4D-201ENST00000309469 PTPRRQ15256 657 aa21.28■■□□□ 1
ATG4D-201ENST00000309469 ARMC12Q5T9G4 340 aa21.28■■□□□ 1
ATG4D-201ENST00000309469 ZNF549Q6P9A3 640 aa21.28■■□□□ 1
ATG4D-201ENST00000309469 TTC30BQ8N4P2 665 aa21.28■■□□□ 1
ATG4D-201ENST00000309469 KLHL29Q96CT2 875 aa21.28■■□□□ 1
ATG4D-201ENST00000309469 UNKQ9C0B0 810 aaKnown RBP21.28■■□□□ 1
ATG4D-201ENST00000309469 SAR1AQ9NR31 198 aa21.28■■□□□ 1
ATG4D-201ENST00000309469 PNPOQ9NVS9 261 aa21.28■■□□□ 1
ATG4D-201ENST00000309469 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.27■■□□□ 1
ATG4D-201ENST00000309469 PGLSO95336 258 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 T-ENOLP0DO92 83 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 HOXB8P17481 243 aaPredicted RBP21.27■■□□□ 1
ATG4D-201ENST00000309469 CTC1Q2NKJ3 1217 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 PITRM1Q5JRX3 1037 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 PRSS36Q5K4E3 855 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 AGAP9Q5VTM2 703 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 ASRGL1Q7L266 308 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 CAMK1DQ8IU85 385 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 OR6K2Q8NGY2 324 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 UBXN10Q96LJ8 280 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 INTS10Q9NVR2 710 aaKnown RBP21.27■■□□□ 1
ATG4D-201ENST00000309469 EVLQ9UI08 416 aaPredicted RBP21.27■■□□□ 1
ATG4D-201ENST00000309469 CXorf51AA0A1B0GTR3 108 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 PER2O15055 1255 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 DLX3O60479 287 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms