RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 KATNAL2Q8IYT4 538 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 PDCD7Q8N8D1 485 aaKnown RBP8.33□□□□□ -1.08
CHD6-201ENST00000309279 IL17RCQ8NAC3 791 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 KDM1BQ8NB78 822 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 TRIM58Q8NG06 486 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 GOT1L1Q8NHS2 421 aaPredicted RBP8.33□□□□□ -1.08
CHD6-201ENST00000309279 FBXO27Q8NI29 283 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 PCDH19Q8TAB3 1148 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 MDM1Q8TC05 714 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 KRT35Q92764 455 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 ACDQ96AP0 544 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 HES6Q96HZ4 224 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 ACE2Q9BYF1 805 aaPredicted RBP8.33□□□□□ -1.08
CHD6-201ENST00000309279 MAGEH1Q9H213 219 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 LRRC19Q9H756 370 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 CRLF2Q9HC73 371 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.33□□□□□ -1.08
CHD6-201ENST00000309279 THAP10Q9P2Z0 257 aaPredicted RBP8.33□□□□□ -1.08
CHD6-201ENST00000309279 ADGRE2Q9UHX3 823 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 DNAI1Q9UI46 699 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 AMFRQ9UKV5 643 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 CAB39Q9Y376 341 aaPredicted RBP8.33□□□□□ -1.08
CHD6-201ENST00000309279 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.33□□□□□ -1.08
CHD6-201ENST00000309279 MUC22E2RYF6 1773 aaPredicted RBP8.33□□□□□ -1.08
CHD6-201ENST00000309279 USP34Q70CQ2 3546 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 KMT2EQ8IZD2 1858 aa8.33□□□□□ -1.08
CHD6-201ENST00000309279 A0A0G2JPF8 293 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 LRRD1A4D1F6 860 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 MIF4GDA9UHW6 222 aaKnown RBP8.32□□□□□ -1.08
CHD6-201ENST00000309279 HNRNPCL3B7ZW38 293 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 SGK1O00141 431 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 DAPK3O43293 454 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 RIPK2O43353 540 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 RAMP2O60895 175 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 ATG13O75143 517 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 ASLP04424 464 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 SRPRAP08240 638 aaKnown RBP8.32□□□□□ -1.08
CHD6-201ENST00000309279 PDHA1P08559 390 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 HNRNPCL4P0DMR1 293 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 POLR2EP19388 210 aaKnown RBP8.32□□□□□ -1.08
CHD6-201ENST00000309279 AMPD1P23109 780 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 CTNNA2P26232 953 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 SOX6P35712 828 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 CDKN2BP42772 138 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 MARCKSL1P49006 195 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 NDST2P52849 883 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 DRG2P55039 364 aaKnown RBP8.32□□□□□ -1.08
CHD6-201ENST00000309279 ECT2LQ008S8 904 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 MMRN1Q13201 1228 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 POLD3Q15054 466 aaPredicted RBP8.32□□□□□ -1.08
CHD6-201ENST00000309279 PARP15Q460N3 678 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 TMEM31Q5JXX7 168 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 GPR139Q6DWJ6 353 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 WDR73Q6P4I2 378 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 Q6ZS52 159 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 TAOK1Q7L7X3 1001 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 RCOR2Q8IZ40 523 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 SPEM1Q8N4L4 309 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 LZTR1Q8N653 840 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 ESX1Q8N693 406 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 TMEM105Q8N8V8 129 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 DCAF4L2Q8NA75 395 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 AVL9Q8NBF6 648 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 EXD1Q8NHP7 514 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 UCMAQ8WVF2 138 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 THOC1Q96FV9 657 aaKnown RBP8.32□□□□□ -1.08
CHD6-201ENST00000309279 MYO19Q96H55 970 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 RNF157Q96PX1 679 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 WDR24Q96S15 920 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 PSMB7Q99436 277 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 UQCC2Q9BRT2 126 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 CALN1Q9BXU9 219 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 CIPCQ9C0C6 399 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 SAP130Q9H0E3 1048 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 KCND1Q9NSA2 647 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 VPS28Q9UK41 221 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 PYCARDQ9ULZ3 195 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 PLA2G4CQ9UP65 541 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 PRELID1Q9Y255 219 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 TMED5Q9Y3A6 229 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 ZNF711Q9Y462 761 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.32□□□□□ -1.08
CHD6-201ENST00000309279 CKAP5Q14008 2032 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 MYO15AQ9UKN7 3530 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 FAM86C2PA6NEL3 165 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 ADAM23O75077 832 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 ZMPSTE24O75844 475 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 CYP2A6P11509 494 aaPredicted RBP8.32□□□□□ -1.08
CHD6-201ENST00000309279 AVPR2P30518 371 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 NTSR1P30989 418 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 TIE1P35590 1138 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 GJC1P36383 396 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 COPS2P61201 443 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 TMPRSS15P98073 1019 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 MTAPQ13126 283 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 ZNF234Q14588 700 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 PAFAH1B3Q15102 231 aaKnown RBP8.32□□□□□ -1.08
CHD6-201ENST00000309279 PLA2G4EQ3MJ16 856 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 TFDP3Q5H9I0 405 aa8.32□□□□□ -1.08
CHD6-201ENST00000309279 SLC9A4Q6AI14 798 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms