RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 OR7A10O76100 309 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 SLC25A3Q00325 362 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 UBAP2LQ14157 1087 aaKnown RBP8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 TYW3Q6IPR3 259 aaKnown RBP8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 RETSATQ6NUM9 610 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 FRMD7Q6ZUT3 714 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 EIF3MQ7L2H7 374 aaKnown RBP8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 CYP2U1Q7Z449 544 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 CLEC10AQ8IUN9 316 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 FAM20CQ8IXL6 584 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 NATD1Q8N6N6 113 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 RDH12Q96NR8 316 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 ERMAPQ96PL5 475 aaPredicted RBP8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 ACOX2Q99424 681 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 WDR6Q9NNW5 1121 aaKnown RBP8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 MAN2B2Q9Y2E5 1009 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 GPSM3Q9Y4H4 160 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 PPLO60437 1756 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 A0A0U1RQJ8 604 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 ISPDA4D126 451 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 E7ENX8 843 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 SERPINA13PQ6UXR4 307 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 COL26A1Q96A83 441 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 ZC3H10Q96K80 434 aaKnown RBP8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 TCF12Q99081 682 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 POLR3BQ9NW08 1133 aaPredicted RBP8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 RBM7Q9Y580 266 aaKnown RBP8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 CEP250Q9BV73 2442 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 DEPDC5O75140 1603 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 OR1E1P30953 314 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 CLCN3P51790 818 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 NEK3P51956 506 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 POU5F1Q01860 360 aaKnown RBP8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 PAMR1Q6UXH9 720 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 USP45Q70EL2 814 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 CENPSQ8N2Z9 138 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 OR56A4Q8NGH8 313 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 SLC16A10Q8TF71 515 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 CLN6Q9NWW5 311 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 MYPNQ86TC9 1320 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 NWD1Q149M9 1564 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 CST8O60676 142 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 DNASE1L3Q13609 305 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 PLET1Q6UQ28 207 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 ALLCQ8N6M5 410 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 FAM47BQ8NA70 645 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 HEXDCQ8WVB3 486 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 SMARCD1Q96GM5 515 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 TPD52L3Q96J77 140 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 RBM4BQ9BQ04 359 aaKnown RBP8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 RBM4Q9BWF3 364 aaKnown RBP8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 S100A14Q9HCY8 104 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 RPTORQ8N122 1335 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 SERPINF2P08697 491 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 GSTT2P0CG29 244 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 GSTT2BP0CG30 244 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 GPD2P43304 727 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 ELP6Q0PNE2 266 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 NR6A1Q15406 480 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 ADGRG2Q8IZP9 1017 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 TTC29Q8NA56 475 aaPredicted RBP8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 ZNF248Q8NDW4 579 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 KCTD15Q96SI1 283 aaPredicted RBP8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 CORO1BQ9BR76 489 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 PDGFDQ9GZP0 370 aaPredicted RBP8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 RCOR3Q9P2K3 495 aaPredicted RBP8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 CLDN25C9JDP6 229 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 APOC4-APOC2K7ER74 178 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 SERPINA1P01009 418 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 APOC2P02655 101 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 TFPTP0C1Z6 253 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 LINC00471Q8N535 108 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 UTP15Q8TED0 518 aaKnown RBP8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 REEP1Q9H902 201 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 PROSCO94903 275 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 SRPRAP08240 638 aaKnown RBP8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 MAGP20916 626 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 CCR1P32246 355 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 ATP13A4Q4VNC1 1196 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 KHDC1Q4VXA5 237 aaKnown RBP8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 EPC2Q52LR7 807 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 PYDC2Q56P42 97 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 C9orf43Q8TAL5 461 aaPredicted RBP8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 FAM84AQ96KN4 292 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 OSMRQ99650 979 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 ZNF624Q9P2J8 865 aaPredicted RBP8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 SAMD4AQ9UPU9 718 aaKnown RBP8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 SH3D21A4FU49 640 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 GTPBP1O00178 669 aaKnown RBP8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 CPNE3O75131 537 aaKnown RBP8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 OR6B1O95007 311 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 OR56A5P0C7T3 313 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 RPA3P35244 121 aaPredicted RBP8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 ORC1Q13415 861 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 CUL2Q13617 745 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 POM121L1PQ3SYA9 428 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 RIC1Q4ADV7 1423 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 TFAP2DQ7Z6R9 452 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 ABI3Q9P2A4 366 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 NCANO14594 1321 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms