RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 FAM124BQ9H5Z6 455 aaPredicted RBP11.18□□□□□ -0.62
PTPN7-201ENST00000309017 MEAF6Q9HAF1 191 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 SLC38A7Q9NVC3 462 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 CD300AQ9UGN4 299 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 ZNHIT2Q9UHR6 403 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 TRIM17Q9Y577 477 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 DGKBQ9Y6T7 804 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 CCL22O00626 93 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 ARPC2O15144 300 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 LRIG2O94898 1065 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 SNAP29O95721 258 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 BMXP51813 675 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 DHRS4L2Q6PKH6 230 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 RETREG3Q86VR2 466 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 MFSD6LQ8IWD5 586 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 ANKRD13AQ8IZ07 590 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 ROPN1LQ96C74 230 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 DGCR6LQ9BY27 220 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 BRD8Q9H0E9 1235 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 AKTIPQ9H8T0 292 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 IFT80Q9P2H3 777 aaPredicted RBP11.18□□□□□ -0.62
PTPN7-201ENST00000309017 ANAPC2Q9UJX6 822 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 AQP12BA6NM10 295 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 TARM1B6A8C7 271 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 GMNNO75496 209 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 FCGR1AP12314 374 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 NOMO2Q5JPE7 1267 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 PRMT9Q6P2P2 845 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 AQP12AQ8IXF9 295 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 ZNF420Q8TAQ5 688 aaPredicted RBP11.18□□□□□ -0.62
PTPN7-201ENST00000309017 RSPH1Q8WYR4 309 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 DCPSQ96C86 337 aaKnown RBP11.18□□□□□ -0.62
PTPN7-201ENST00000309017 SDCCAG3Q96C92 435 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 SLC45A3Q96JT2 553 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 HOPXQ9BPY8 73 aaPredicted RBP11.18□□□□□ -0.62
PTPN7-201ENST00000309017 C1orf50Q9BV19 199 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 MUC3BQ9H195 1237 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 ARMC1Q9NVT9 282 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 RBM22Q9NW64 420 aaKnown RBP eCLIP11.18□□□□□ -0.62
PTPN7-201ENST00000309017 HACD3Q9P035 362 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 CRYL1Q9Y2S2 319 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 COL11A1P12107 1806 aaPredicted RBP11.18□□□□□ -0.62
PTPN7-201ENST00000309017 CITO14578 2027 aa11.18□□□□□ -0.62
PTPN7-201ENST00000309017 ZBBXA8MT70 800 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 B4GAT1O43505 415 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 CLASP2O75122 1294 aaKnown RBP11.17□□□□□ -0.62
PTPN7-201ENST00000309017 CD4P01730 458 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 CAPNS1P04632 268 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 HGFP14210 728 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 CES1P23141 567 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 KCNK10P57789 538 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 PLIN5Q00G26 463 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 CREB5Q02930 508 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 BNIP2Q12982 314 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 GPR158Q5T848 1215 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 INTS11Q5TA45 600 aaKnown RBP11.17□□□□□ -0.62
PTPN7-201ENST00000309017 ARHGAP36Q6ZRI8 547 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 EPHX4Q8IUS5 362 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 SLC15A3Q8IY34 581 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 CRYBG2Q8N1P7 616 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 SLC15A4Q8N697 577 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 NAT16Q8N8M0 369 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 KLRG1Q96E93 195 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 GPR78Q96P69 363 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 OSMRQ99650 979 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 NFKBIZQ9BYH8 718 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 PIN4Q9Y237 131 aaKnown RBP11.17□□□□□ -0.62
PTPN7-201ENST00000309017 SPTLC1O15269 473 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 LINC00032P0C843 101 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 PCNAP12004 261 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 HALP42357 657 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 RXRGP48443 463 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 GEMP55040 296 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 YWHAHQ04917 246 aaPredicted RBP11.17□□□□□ -0.62
PTPN7-201ENST00000309017 MOGQ16653 247 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 FBXO48Q5FWF7 155 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 TECRLQ5HYJ1 363 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 TMEM214Q6NUQ4 689 aaKnown RBP11.17□□□□□ -0.62
PTPN7-201ENST00000309017 SLC27A1Q6PCB7 646 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 MFSD2AQ8NA29 543 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 SEPT3Q9UH03 358 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 GTF2IRD1Q9UHL9 959 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 WDR37Q9Y2I8 494 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 TCAF1Q9Y4C2 921 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 TIMM13Q9Y5L4 95 aaPredicted RBP11.17□□□□□ -0.62
PTPN7-201ENST00000309017 CSADQ9Y600 493 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 USP34Q70CQ2 3546 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 H3BMM5 538 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 MOCS2O96007 188 aaPredicted RBP11.17□□□□□ -0.62
PTPN7-201ENST00000309017 FUCA1P04066 466 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 DNAJB2P25686 324 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 ELK4P28324 431 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 DNAJB13P59910 316 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 ZNF789Q5FWF6 425 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 RABL3Q5HYI8 236 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 NANOGP8Q6NSW7 305 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 STK32CQ86UX6 486 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 SFRP1Q8N474 314 aa11.17□□□□□ -0.62
PTPN7-201ENST00000309017 PTGR2Q8N8N7 351 aaPredicted RBP11.17□□□□□ -0.62
PTPN7-201ENST00000309017 VPS33AQ96AX1 596 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms