RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 RABEPKQ7Z6M1 372 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 DNAAF5Q86Y56 855 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 SNED1Q8TER0 1413 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 TMEM216Q9P0N5 145 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 PIKFYVEQ9Y2I7 2098 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 C15orf38-AP3S2A0A0A6YYH1 394 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 FAM20BO75063 409 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 TAF10Q12962 218 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 ABRQ12979 859 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 PAPD7Q5XG87 772 aaKnown RBP8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 THOC7Q6I9Y2 204 aaKnown RBP8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 C17orf99Q6UX52 265 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 ARPINQ7Z6K5 226 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 ERP27Q96DN0 273 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 IRF2BPLQ9H1B7 796 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 RHBGQ9H310 441 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 KLC4Q9NSK0 619 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 C22orf31O95567 290 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 CCND1P24385 295 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 NDUFS1P28331 727 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 MDH1P40925 334 aaKnown RBP8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 RPL19P84098 196 aaKnown RBP8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 CBWD6Q4V339 395 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 MPP5Q8N3R9 675 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 SRFBP1Q8NEF9 429 aaKnown RBP8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 BRSK1Q8TDC3 778 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 EEF1AKMT1Q8WVE0 214 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 HNRNPLLQ8WVV9 542 aaKnown RBP8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 METTL21AQ8WXB1 218 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 TPD52L3Q96J77 140 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 ZDHHC6Q9H6R6 413 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 ZNF624Q9P2J8 865 aaPredicted RBP8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 GPSM3Q9Y4H4 160 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 PTPRJQ12913 1337 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 TRIM43BA6NCK2 446 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 PER2O15055 1255 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 TPST1O60507 370 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 C1RP00736 705 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 SLC35G4P0C7Q5 338 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 PRG2P13727 222 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 HSD17B2P37059 387 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 PNLIPRP1P54315 467 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 DSG1Q02413 1049 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 GHRHRQ02643 423 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 KPNB1Q14974 876 aaKnown RBP8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 MFSD7Q6UXD7 560 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 KCNMB4Q86W47 210 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 APLFQ8IW19 511 aaPredicted RBP8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 ENKURQ8TC29 256 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 LPPQ93052 612 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 MS4A14Q96JA4 679 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 NELL2Q99435 816 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 TPRKBQ9Y3C4 175 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 KLHL33A6NCF5 533 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 AKT2P31751 481 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 MFSD5Q6N075 450 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 TPGS1Q6ZTW0 290 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 MILR1Q7Z6M3 343 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 SUN3Q8TAQ9 357 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 CHAMP1Q96JM3 812 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 ROGDIQ9GZN7 287 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 CHP2O43745 196 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 SEC22BO75396 215 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 SNX4O95219 450 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 CCNE2O96020 404 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 HNRNPH3P31942 346 aaKnown RBP8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 SERPINB5P36952 375 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 SOX10P56693 466 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 CLIP3Q96DZ5 547 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 SLC38A2Q96QD8 506 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 CNTN3Q9P232 1028 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 OPTCQ9UBM4 332 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 BTBD3Q9Y2F9 522 aa8.35□□□□□ -1.07
PCDHB1-201ENST00000306549 SLC28A1O00337 649 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 MLYCDO95822 493 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 CLCN5P51795 746 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 IL5RAQ01344 420 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 ZNF33AQ06730 810 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 ACSM2AQ08AH3 577 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 ZNF846Q147U1 533 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 ACSM2BQ68CK6 577 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 STAG3L4Q8TBR4 150 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 EBNA1BP2Q99848 306 aaKnown RBP8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 MGAT4AQ9UM21 535 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 LOC100653049A0A140TA62 436 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 L1CAMP32004 1257 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 SUOXP51687 545 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 KCNT1Q5JUK3 1230 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 TXNDC11Q6PKC3 985 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 ZNF783Q6ZMS7 281 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 ARID3BQ8IVW6 561 aaPredicted RBP8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 LRRC46Q96FV0 321 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 NSMCE2Q96MF7 247 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 ZNF599Q96NL3 588 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 TRMT61BQ9BVS5 477 aaKnown RBP8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 RASSF1Q9NS23 344 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 NCANO14594 1321 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 UBE2QL1A1L167 161 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 CCDC154A6NI56 674 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 INPP4BO15327 924 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms