RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CLCNKBP51801 687 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 TOP3AQ13472 1001 aaPredicted RBP15.97■□□□□ 0.15
USP42-201ENST00000306177 ZDHHC20Q5W0Z9 365 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 BHLHB9Q6PI77 547 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 COLGALT2Q8IYK4 626 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 ZCCHC7Q8N3Z6 543 aaKnown RBP15.97■□□□□ 0.15
USP42-201ENST00000306177 C1orf50Q9BV19 199 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 PCDH12Q9NPG4 1184 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 NOCTQ9UK39 431 aaKnown RBP15.97■□□□□ 0.15
USP42-201ENST00000306177 ATP6AP2A0A1C7CYW4 349 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 GRM6O15303 877 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 ATP6AP2O75787 350 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 CCNCP24863 283 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 CPSF6Q16630 551 aaKnown RBP eCLIP15.97■□□□□ 0.15
USP42-201ENST00000306177 CDC73Q6P1J9 531 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 KIAA1324Q6UXG2 1013 aaKnown RBP15.97■□□□□ 0.15
USP42-201ENST00000306177 CUZD1Q86UP6 607 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 OR8D1Q8WZ84 308 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 FAXDC2Q96IV6 333 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 DCUN1D5Q9BTE7 237 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 C6orf62Q9GZU0 229 aaPredicted RBP15.97■□□□□ 0.15
USP42-201ENST00000306177 CFAP97Q9P2B7 532 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 PRPF19Q9UMS4 504 aaKnown RBP15.97■□□□□ 0.15
USP42-201ENST00000306177 SLC25A14O95258 325 aaPredicted RBP15.97■□□□□ 0.15
USP42-201ENST00000306177 ELFN1P0C7U0 828 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 EPORP19235 508 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 PTDSS1P48651 473 aaKnown RBP15.97■□□□□ 0.15
USP42-201ENST00000306177 YBEYP58557 167 aaPredicted RBP15.97■□□□□ 0.15
USP42-201ENST00000306177 SERHL2Q9H4I8 314 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 SERHLQ9NQF3 203 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 ZNF232Q9UNY5 417 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 TRAF6Q9Y4K3 522 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 TLL1O43897 1013 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 ENTPD5O75356 428 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 UMPSP11172 480 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 DGUOKQ16854 277 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 MPPE1Q53F39 396 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 FNBP1LQ5T0N5 605 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 EFCAB3Q8N7B9 438 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 TIFAQ96CG3 184 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 NTPCRQ9BSD7 190 aaKnown RBP15.97■□□□□ 0.15
USP42-201ENST00000306177 SPATA5L1Q9BVQ7 753 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 OSBPL6Q9BZF3 934 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 FAM192AQ9GZU8 254 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 RBPJLQ9UBG7 517 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 PACSIN3Q9UKS6 424 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 TSC22D4Q9Y3Q8 395 aa15.97■□□□□ 0.15
USP42-201ENST00000306177 AP2A1O95782 977 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 CORO1AP31146 461 aaKnown RBP15.96■□□□□ 0.15
USP42-201ENST00000306177 ST13P50502 369 aaKnown RBP15.96■□□□□ 0.15
USP42-201ENST00000306177 CDC42P60953 191 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 USP4Q13107 963 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 COL26A1Q96A83 441 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 ZFYVE1Q9HBF4 777 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 ARIH1Q9Y4X5 557 aaPredicted RBP15.96■□□□□ 0.15
USP42-201ENST00000306177 KRT36O76013 467 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 ANPEPP15144 967 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 CHN2P52757 468 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 ARMC4Q5T2S8 1044 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 HECTD2Q5U5R9 776 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 ZC3H7AQ8IWR0 971 aaKnown RBP15.96■□□□□ 0.15
USP42-201ENST00000306177 SDCBP2Q9H190 292 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 WRAP73Q9P2S5 460 aaPredicted RBP15.96■□□□□ 0.15
USP42-201ENST00000306177 SALL4Q9UJQ4 1053 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 VPS4AQ9UN37 437 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 TGDSO95455 350 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 GNRH1P01148 92 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 TSPAN19P0C672 248 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 SLC35G4P0C7Q5 338 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 ITGA2P17301 1181 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 AMD1P17707 334 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 TACR2P21452 398 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 HTR1BP28222 390 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 HADHBP55084 474 aaKnown RBP15.96■□□□□ 0.15
USP42-201ENST00000306177 CDH13P55290 713 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 ZNHIT3Q15649 155 aaPredicted RBP15.96■□□□□ 0.15
USP42-201ENST00000306177 RHBDF2Q6PJF5 856 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 MACC1Q6ZN28 852 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 R3HCC1LQ7Z5L2 792 aaKnown RBP15.96■□□□□ 0.15
USP42-201ENST00000306177 GPR156Q8NFN8 814 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 POP5Q969H6 163 aaKnown RBP15.96■□□□□ 0.15
USP42-201ENST00000306177 SLC4A5Q9BY07 1137 aa15.96■□□□□ 0.15
USP42-201ENST00000306177 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.96■□□□□ 0.15
USP42-201ENST00000306177 NEDD8-MDP1E9PL57 170 aa15.96■□□□□ 0.14
USP42-201ENST00000306177 C1RP00736 705 aa15.96■□□□□ 0.14
USP42-201ENST00000306177 UQCRBP14927 111 aa15.96■□□□□ 0.14
USP42-201ENST00000306177 SP100P23497 879 aaPredicted RBP15.96■□□□□ 0.14
USP42-201ENST00000306177 LILRA4P59901 499 aa15.96■□□□□ 0.14
USP42-201ENST00000306177 PPIDQ08752 370 aaKnown RBP15.96■□□□□ 0.14
USP42-201ENST00000306177 EIF3MQ7L2H7 374 aaKnown RBP15.96■□□□□ 0.14
USP42-201ENST00000306177 ULK2Q8IYT8 1036 aa15.96■□□□□ 0.14
USP42-201ENST00000306177 OR6K2Q8NGY2 324 aa15.96■□□□□ 0.14
USP42-201ENST00000306177 TFAP2BQ92481 460 aa15.96■□□□□ 0.14
USP42-201ENST00000306177 ARHGEF4Q9NR80 690 aa15.96■□□□□ 0.14
USP42-201ENST00000306177 C3orf18Q9UK00 162 aa15.96■□□□□ 0.14
USP42-201ENST00000306177 PCDHB1Q9Y5F3 818 aa15.96■□□□□ 0.14
USP42-201ENST00000306177 PRMT5O14744 637 aaPredicted RBP15.95■□□□□ 0.14
USP42-201ENST00000306177 ADSSP30520 456 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 CCR4P51679 360 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 ITGA1P56199 1179 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms