RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 SLC45A3Q96JT2 553 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 UBXN10Q96LJ8 280 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 TBATAQ96M53 351 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 GSTO2Q9H4Y5 243 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 IL1RL2Q9HB29 575 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 UXTQ9UBK9 157 aaPredicted RBP15.18■□□□□ 0.02
CSDC2-201ENST00000306149 DMTF1Q9Y222 760 aa15.18■□□□□ 0.02
CSDC2-201ENST00000306149 H0YJX3 145 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 SOAT2O75908 522 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 SIX3O95343 332 aaPredicted RBP15.17■□□□□ 0.02
CSDC2-201ENST00000306149 ASLP04424 464 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 C8BP07358 591 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 EFEMP1Q12805 493 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 TUSC3Q13454 348 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 PABPC1LQ4VXU2 614 aaKnown RBP15.17■□□□□ 0.02
CSDC2-201ENST00000306149 KLHDC10Q6PID8 442 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 AMIGO2Q86SJ2 522 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 CCDC117Q8IWD4 279 aaPredicted RBP15.17■□□□□ 0.02
CSDC2-201ENST00000306149 C2orf69Q8N8R5 385 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 EZH1Q92800 747 aaPredicted RBP15.17■□□□□ 0.02
CSDC2-201ENST00000306149 TOP1MTQ969P6 601 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 EME1Q96AY2 570 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 PTERQ96BW5 349 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 LRCH3Q96II8 777 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 MTG1Q9BT17 334 aaPredicted RBP15.17■□□□□ 0.02
CSDC2-201ENST00000306149 GRIP2Q9C0E4 1043 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 MEAF6Q9HAF1 191 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 EML4Q9HC35 981 aaKnown RBP15.17■□□□□ 0.02
CSDC2-201ENST00000306149 EPS15L1Q9UBC2 864 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 IQCA1LA6NCM1 817 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 CCDC160A6NGH7 325 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 S1PR4O95977 384 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 AKR1A1P14550 325 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 RENBPP51606 427 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 CLCN5P51795 746 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 SIRPB2Q5JXA9 342 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 ISCA2Q86U28 154 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 SERINC5Q86VE9 423 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 ZNF280BQ86YH2 543 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 SCML4Q8N228 414 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 PGBD5Q8N414 524 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 TTC9BQ8N6N2 239 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 DRAXINQ8NBI3 349 aaPredicted RBP15.17■□□□□ 0.02
CSDC2-201ENST00000306149 B4GALNT2Q8NHY0 566 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 DDI1Q8WTU0 396 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 HIC2Q96JB3 615 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 SP110Q9HB58 689 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 MRPL40Q9NQ50 206 aaKnown RBP15.17■□□□□ 0.02
CSDC2-201ENST00000306149 TMCO1Q9UM00 188 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 TRPM7Q96QT4 1865 aa15.17■□□□□ 0.02
CSDC2-201ENST00000306149 TDRD15B5MCY1 1934 aaKnown RBP15.16■□□□□ 0.02
CSDC2-201ENST00000306149 PRSS56P0CW18 603 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 STX5Q13190 355 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 ACAP2Q15057 778 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 MGAT5BQ3V5L5 792 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 TMEM259Q4ZIN3 620 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 BORAQ6PGQ7 559 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 KIAA0408Q6ZU52 694 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 IGSF8Q969P0 613 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 TRIM62Q9BVG3 475 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 OCEL1Q9H607 264 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 COQ10BQ9H8M1 238 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 DSEQ9UL01 958 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 AP4S1Q9Y587 144 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 SNX13Q9Y5W8 968 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 ARL5AQ9Y689 179 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 A0A0U1RQF3 1178 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 C7orf72A4D263 438 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 MRASO14807 208 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 SNRPB2P08579 225 aaKnown RBP15.16■□□□□ 0.02
CSDC2-201ENST00000306149 RBP1P09455 135 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 MGAT3Q09327 533 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 SQLEQ14534 574 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 MS4A13Q5J8X5 152 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 RAP1GAP2Q684P5 730 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 CALML6Q8TD86 181 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 BLOC1S5Q8TDH9 187 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 UNC93B1Q9H1C4 597 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 ARNT2Q9HBZ2 717 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 RGS18Q9NS28 235 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 SARDHQ9UL12 918 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 Q9Y3F1 56 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.16■□□□□ 0.02
CSDC2-201ENST00000306149 ACTL7AQ9Y615 435 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 PTPRDP23468 1912 aa15.16■□□□□ 0.02
CSDC2-201ENST00000306149 PATJQ8NI35 1801 aa15.15■□□□□ 0.02
CSDC2-201ENST00000306149 ALDOCP09972 364 aaKnown RBP15.15■□□□□ 0.02
CSDC2-201ENST00000306149 TBX4P57082 545 aa15.15■□□□□ 0.02
CSDC2-201ENST00000306149 MAPRE2Q15555 327 aa15.15■□□□□ 0.02
CSDC2-201ENST00000306149 MAPRE1Q15691 268 aaKnown RBP15.15■□□□□ 0.02
CSDC2-201ENST00000306149 GEN1Q17RS7 908 aa15.15■□□□□ 0.02
CSDC2-201ENST00000306149 BEND5Q7L4P6 421 aa15.15■□□□□ 0.02
CSDC2-201ENST00000306149 CHERPQ8IWX8 916 aaKnown RBP15.15■□□□□ 0.02
CSDC2-201ENST00000306149 SLCO4A1Q96BD0 722 aa15.15■□□□□ 0.02
CSDC2-201ENST00000306149 FAR2Q96K12 515 aa15.15■□□□□ 0.02
CSDC2-201ENST00000306149 NSUN5Q96P11 429 aaKnown RBP15.15■□□□□ 0.02
CSDC2-201ENST00000306149 SERPINB11Q96P15 392 aa15.15■□□□□ 0.02
CSDC2-201ENST00000306149 ATP13A1Q9HD20 1204 aa15.15■□□□□ 0.02
CSDC2-201ENST00000306149 GMIPQ9P107 970 aa15.15■□□□□ 0.02
CSDC2-201ENST00000306149 NLRC5Q86WI3 1866 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms