RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 PPM1MQ96MI6 270 aa13.32□□□□□ -0.28
DDX54-201ENST00000306014 ZYG11BQ9C0D3 744 aa13.32□□□□□ -0.28
DDX54-201ENST00000306014 BPIFA1Q9NP55 256 aa13.32□□□□□ -0.28
DDX54-201ENST00000306014 HMG20AQ9NP66 347 aa13.32□□□□□ -0.28
DDX54-201ENST00000306014 DOLKQ9UPQ8 538 aa13.32□□□□□ -0.28
DDX54-201ENST00000306014 PCDHB5Q9Y5E4 795 aa13.32□□□□□ -0.28
DDX54-201ENST00000306014 PRRG1O14668 218 aa13.32□□□□□ -0.28
DDX54-201ENST00000306014 USP2O75604 605 aaPredicted RBP13.32□□□□□ -0.28
DDX54-201ENST00000306014 ATG7O95352 703 aa13.32□□□□□ -0.28
DDX54-201ENST00000306014 POU1F1P28069 291 aa13.32□□□□□ -0.28
DDX54-201ENST00000306014 NNMTP40261 264 aa13.32□□□□□ -0.28
DDX54-201ENST00000306014 GCNT7Q6ZNI0 430 aa13.32□□□□□ -0.28
DDX54-201ENST00000306014 DQX1Q8TE96 717 aaKnown RBP13.32□□□□□ -0.28
DDX54-201ENST00000306014 TWIST2Q8WVJ9 160 aa13.32□□□□□ -0.28
DDX54-201ENST00000306014 MTFMTQ96DP5 389 aaKnown RBP13.32□□□□□ -0.28
DDX54-201ENST00000306014 FTHL17Q9BXU8 183 aa13.32□□□□□ -0.28
DDX54-201ENST00000306014 C6orf62Q9GZU0 229 aaPredicted RBP13.32□□□□□ -0.28
DDX54-201ENST00000306014 RAD21L1Q9H4I0 556 aa13.32□□□□□ -0.28
DDX54-201ENST00000306014 RERGLQ9H628 205 aa13.32□□□□□ -0.28
DDX54-201ENST00000306014 PRDM5Q9NQX1 630 aaPredicted RBP13.32□□□□□ -0.28
DDX54-201ENST00000306014 COL22A1Q8NFW1 1626 aaPredicted RBP13.31□□□□□ -0.28
DDX54-201ENST00000306014 H3BNX3 289 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 H3BSA7 217 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 SLC22A3O75751 556 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 SOAT1P35610 550 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 HALP42357 657 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 SLC1A2P43004 574 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 ETV4P43268 484 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 UBE3AQ05086 875 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 PSMD5Q16401 504 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 CDCA2Q69YH5 1023 aaPredicted RBP13.31□□□□□ -0.28
DDX54-201ENST00000306014 TTC23LQ6PF05 361 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 CNSTQ6PJW8 725 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 RALGPS2Q86X27 583 aaPredicted RBP13.31□□□□□ -0.28
DDX54-201ENST00000306014 NRG4Q8WWG1 115 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 C12orf42Q96LP6 360 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 TBATAQ96M53 351 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 CXorf21Q9HAI6 301 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 UBA2Q9UBT2 640 aaPredicted RBP13.31□□□□□ -0.28
DDX54-201ENST00000306014 SQORQ9Y6N5 450 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 KRT75O95678 551 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 TKTP29401 623 aaKnown RBP13.31□□□□□ -0.28
DDX54-201ENST00000306014 CDH15P55291 814 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 CDK18Q07002 472 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 MAPKAPK3Q16644 382 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 RGMBQ6NW40 437 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 GPRIN3Q6ZVF9 776 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 NKAPQ8N5F7 415 aaKnown RBP13.31□□□□□ -0.28
DDX54-201ENST00000306014 OR7A2PQ8NGA2 310 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 ZFAND2BQ8WV99 257 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 CASP10Q92851 521 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 SH3KBP1Q96B97 665 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 PCED1BQ96HM7 432 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 EPS8L2Q9H6S3 715 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 BBIP1A8MTZ0 92 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 DLX3O60479 287 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 KCNH1O95259 989 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 ATXN8OSP0DMR3 200 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 IFNA8P32881 189 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 TMEM63BQ5T3F8 832 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 TAC4Q86UU9 113 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 AHI1Q8N157 1196 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 UTP15Q8TED0 518 aaKnown RBP13.31□□□□□ -0.28
DDX54-201ENST00000306014 SPATA17Q96L03 361 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 GMLQ99445 158 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 PCYT2Q99447 389 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 RHOBTB2Q9BYZ6 727 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 TPRKBQ9Y3C4 175 aa13.31□□□□□ -0.28
DDX54-201ENST00000306014 MYOCOSA0A1B0GUC4 107 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 A8MX80 341 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 MLYCDO95822 493 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 DAOAP59103 153 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 NAA20P61599 178 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 CLDN10P78369 228 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 RRM2BQ7LG56 351 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 SAPCD2Q86UD0 394 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 SLC44A2Q8IWA5 706 aaPredicted RBP13.3□□□□□ -0.28
DDX54-201ENST00000306014 ADHFE1Q8IWW8 467 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 CPSF7Q8N684 471 aaKnown RBP13.3□□□□□ -0.28
DDX54-201ENST00000306014 OR4L1Q8NH43 312 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 ADAM2Q99965 735 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 AGO3Q9H9G7 860 aaKnown RBP13.3□□□□□ -0.28
DDX54-201ENST00000306014 ATAD3AQ9NVI7 634 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 LSM7Q9UK45 103 aaKnown RBP13.3□□□□□ -0.28
DDX54-201ENST00000306014 ITGB4P16144 1822 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 MYO18AQ92614 2054 aaKnown RBP13.3□□□□□ -0.28
DDX54-201ENST00000306014 E7ENX8 843 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 ZBTB11O95625 1053 aaPredicted RBP13.3□□□□□ -0.28
DDX54-201ENST00000306014 CST1P01037 141 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 NCK1P16333 377 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 ZNF7P17097 686 aaPredicted RBP13.3□□□□□ -0.28
DDX54-201ENST00000306014 MTTPP55157 894 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 RPL38P63173 70 aaKnown RBP13.3□□□□□ -0.28
DDX54-201ENST00000306014 TBC1D21Q8IYX1 336 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 OTULINQ96BN8 352 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 TPD52L3Q96J77 140 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 ADI1Q9BV57 179 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 FAM124BQ9H5Z6 455 aaPredicted RBP13.3□□□□□ -0.28
DDX54-201ENST00000306014 SMPD4Q9NXE4 827 aa13.3□□□□□ -0.28
DDX54-201ENST00000306014 FBXW11Q9UKB1 542 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms