RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 ALDH4A1P30038 563 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 PRKCDQ05655 676 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 C2orf76Q3KRA6 126 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 ANKRD26P1Q6NSI1 321 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 QSOX2Q6ZRP7 698 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 DNAAF5Q86Y56 855 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 GPALPP1Q8IXQ4 340 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 ZSWIM1Q9BR11 485 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 RMI1Q9H9A7 625 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 CORO2BQ9UQ03 480 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 YARS2Q9Y2Z4 477 aaKnown RBP14.27□□□□□ -0.13
HIPK3-201ENST00000303296 AP1M2Q9Y6Q5 423 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 PRAMEF33A0A0G2JMD5 474 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 TPP1O14773 563 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 PRAMEF10O60809 474 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 PCCBP05166 539 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 CDH3P22223 829 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 SLC6A9P48067 706 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 MXD1Q05195 221 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 RAB39AQ14964 217 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 CHST15Q7LFX5 561 aaPredicted RBP14.27□□□□□ -0.13
HIPK3-201ENST00000303296 THAP5Q7Z6K1 395 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 ATG4CQ96DT6 458 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 FBXO6Q9NRD1 293 aaPredicted RBP14.27□□□□□ -0.13
HIPK3-201ENST00000303296 ZNF70Q9UC06 446 aaPredicted RBP14.27□□□□□ -0.13
HIPK3-201ENST00000303296 EGFL7Q9UHF1 273 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 GAS2O43903 313 aaKnown RBP14.27□□□□□ -0.13
HIPK3-201ENST00000303296 NR2F6P10588 404 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 MTHFD1P11586 935 aaKnown RBP14.27□□□□□ -0.13
HIPK3-201ENST00000303296 FUT4P22083 530 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 FOXM1Q08050 763 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 NFE2Q16621 373 aaPredicted RBP14.27□□□□□ -0.13
HIPK3-201ENST00000303296 MFSD3Q96ES6 412 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 KCND2Q9NZV8 630 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 PCDHA3Q9Y5H8 950 aa14.27□□□□□ -0.13
HIPK3-201ENST00000303296 RFXANKO14593 260 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 SCAMP1O15126 338 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 CYP1A1P04798 512 aaPredicted RBP14.26□□□□□ -0.13
HIPK3-201ENST00000303296 RRM1P23921 792 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 SSTR1P30872 391 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 MYL6P60660 151 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 KLHL26Q53HC5 615 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 FBXO47Q5MNV8 452 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 TMPRSS11AQ6ZMR5 421 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 DDX3XO00571 662 aaKnown RBP eCLIP14.26□□□□□ -0.133e-12■■■□□ 19.2
HIPK3-201ENST00000303296 PRLP01236 227 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 PON1P27169 355 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 ELK3P41970 407 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 OR3A3P47888 321 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 OR3A2P47893 321 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 ZBTB8BQ8NAP8 495 aaPredicted RBP14.26□□□□□ -0.13
HIPK3-201ENST00000303296 KCT2Q8NC54 265 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 C7orf57Q8NEG2 295 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 HCAR2Q8TDS4 363 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 KXD1Q9BQD3 176 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 FDXACB1Q9BRP7 624 aaPredicted RBP14.26□□□□□ -0.13
HIPK3-201ENST00000303296 LDAHQ9H6V9 325 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 EIF3KQ9UBQ5 218 aaKnown RBP14.26□□□□□ -0.13
HIPK3-201ENST00000303296 MRPS23Q9Y3D9 190 aaKnown RBP14.26□□□□□ -0.13
HIPK3-201ENST00000303296 GMPSP49915 693 aaPredicted RBP14.26□□□□□ -0.13
HIPK3-201ENST00000303296 ANKRD13AQ8IZ07 590 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 NOA1Q8NC60 698 aaKnown RBP14.26□□□□□ -0.13
HIPK3-201ENST00000303296 MYCBPAPQ8TBZ2 947 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 TCOF1Q13428 1488 aaKnown RBP14.26□□□□□ -0.13
HIPK3-201ENST00000303296 PGDP52209 483 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 CORO7P57737 925 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 SNAPC1Q16533 368 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 TREML1Q86YW5 311 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 GPR65Q8IYL9 337 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 CHST13Q8NET6 341 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 PTCD3Q96EY7 689 aaKnown RBP14.26□□□□□ -0.13
HIPK3-201ENST00000303296 AARSD1Q9BTE6 412 aaKnown RBP14.26□□□□□ -0.13
HIPK3-201ENST00000303296 COMMD4Q9H0A8 199 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 AGPAT3Q9NRZ7 376 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 R3HDM2Q9Y2K5 976 aaKnown RBP14.26□□□□□ -0.13
HIPK3-201ENST00000303296 CFAP43Q8NDM7 1665 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 TOPBP1Q92547 1522 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 RLN2P04090 185 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 SCNN1AP37088 669 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 CTSOP43234 321 aaPredicted RBP14.26□□□□□ -0.13
HIPK3-201ENST00000303296 CMTR2Q8IYT2 770 aaKnown RBP14.26□□□□□ -0.13
HIPK3-201ENST00000303296 OR2AJ1Q8NGZ0 328 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 BORCS8Q96FH0 119 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 GNB5O14775 395 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 PAX7P23759 505 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 NDST1P52848 882 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 CCDC80Q76M96 950 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 SP140LQ9H930 580 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 TREM1Q9NP99 234 aa14.26□□□□□ -0.13
HIPK3-201ENST00000303296 IFI30P13284 250 aa14.25□□□□□ -0.13
HIPK3-201ENST00000303296 NRG1Q02297 640 aaPredicted RBP14.25□□□□□ -0.13
HIPK3-201ENST00000303296 PPP3CAQ08209 521 aa14.25□□□□□ -0.13
HIPK3-201ENST00000303296 RASGEF1BQ0VAM2 473 aa14.25□□□□□ -0.13
HIPK3-201ENST00000303296 PRKG2Q13237 762 aa14.25□□□□□ -0.13
HIPK3-201ENST00000303296 CPSF6Q16630 551 aaKnown RBP eCLIP14.25□□□□□ -0.13
HIPK3-201ENST00000303296 GPR139Q6DWJ6 353 aa14.25□□□□□ -0.13
HIPK3-201ENST00000303296 MCCC1Q96RQ3 725 aaPredicted RBP14.25□□□□□ -0.13
HIPK3-201ENST00000303296 MGME1Q9BQP7 344 aa14.25□□□□□ -0.13
HIPK3-201ENST00000303296 POLR1EQ9GZS1 481 aaKnown RBP14.25□□□□□ -0.13
HIPK3-201ENST00000303296 NR2E1Q9Y466 385 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms