RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 VPS35Q96QK1 796 aa21.11■□□□□ 0.97
LETM1-201ENST00000302787 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.11■□□□□ 0.973e-12■■■■□ 26.4
LETM1-201ENST00000302787 CLN6Q9NWW5 311 aa21.11■□□□□ 0.97
LETM1-201ENST00000302787 ZNF180Q9UJW8 692 aa21.11■□□□□ 0.97
LETM1-201ENST00000302787 POLR3HQ9Y535 204 aaPredicted RBP21.11■□□□□ 0.97
LETM1-201ENST00000302787 COL6A2P12110 1019 aa21.11■□□□□ 0.97
LETM1-201ENST00000302787 CES1P23141 567 aa21.11■□□□□ 0.97
LETM1-201ENST00000302787 PRKAG1P54619 331 aa21.11■□□□□ 0.97
LETM1-201ENST00000302787 LSM3P62310 102 aaKnown RBP21.11■□□□□ 0.97
LETM1-201ENST00000302787 ROR2Q01974 943 aaKnown RBP21.11■□□□□ 0.97
LETM1-201ENST00000302787 HOPXQ9BPY8 73 aaPredicted RBP21.11■□□□□ 0.97
LETM1-201ENST00000302787 NIFKQ9BYG3 293 aaKnown RBP21.11■□□□□ 0.97
LETM1-201ENST00000302787 SPATA2Q9UM82 520 aa21.11■□□□□ 0.97
LETM1-201ENST00000302787 RPTORQ8N122 1335 aa21.11■□□□□ 0.97
LETM1-201ENST00000302787 GNA13Q14344 377 aa21.11■□□□□ 0.97
LETM1-201ENST00000302787 ERLEC1Q96DZ1 483 aa21.11■□□□□ 0.97
LETM1-201ENST00000302787 PPP1R16AQ96I34 528 aa21.11■□□□□ 0.97
LETM1-201ENST00000302787 PLGRKTQ9HBL7 147 aa21.11■□□□□ 0.97
LETM1-201ENST00000302787 NELFEP18615 380 aaKnown RBP21.1■□□□□ 0.97
LETM1-201ENST00000302787 IL12RB1P42701 662 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 SEMA5AQ13591 1074 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 DPYSQ14117 519 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 CPSF6Q16630 551 aaKnown RBP eCLIP21.1■□□□□ 0.97
LETM1-201ENST00000302787 TIGD2Q4W5G0 525 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 MON1AQ86VX9 555 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 ITCHQ96J02 903 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 SSU72Q9NP77 194 aaKnown RBP21.1■□□□□ 0.97
LETM1-201ENST00000302787 CDH22Q9UJ99 828 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 GSTK1Q9Y2Q3 226 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 ETS2P15036 469 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 ITGA2P17301 1181 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 MAPK9P45984 424 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 HADHBP55084 474 aaKnown RBP21.1■□□□□ 0.97
LETM1-201ENST00000302787 DLG2Q15700 870 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 PSMD5Q16401 504 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 SLC5A9Q2M3M2 681 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 PPM1JQ5JR12 505 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 HECTD2Q5U5R9 776 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 OR52E6Q96RD3 313 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 VPS4AQ9UN37 437 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 SMIM28A0A1B0GU29 152 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 GTF2E2P29084 291 aaKnown RBP21.1■□□□□ 0.97
LETM1-201ENST00000302787 C1orf127Q8N9H9 656 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 GPR152Q8TDT2 470 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 SUSD6Q92537 303 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 NDRG1Q92597 394 aaKnown RBP21.1■□□□□ 0.97
LETM1-201ENST00000302787 SLC47A1Q96FL8 570 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 FAM47E-STBD1D6RA91 191 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 MSI1O43347 362 aaKnown RBP21.1■□□□□ 0.97
LETM1-201ENST00000302787 TLR5O60602 858 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 SIN3BO75182 1162 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 FTH1P02794 183 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 FECHP22830 423 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 CXCR2P25025 360 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 IKBKEQ14164 716 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 GPR156Q8NFN8 814 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 WDR60Q8WVS4 1066 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 VMP1Q96GC9 406 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 PANX1Q96RD7 426 aa21.1■□□□□ 0.97
LETM1-201ENST00000302787 SEC24AO95486 1093 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 TRPM4Q8TD43 1214 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 SIX2Q9NPC8 291 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 CHRAC1Q9NRG0 131 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 NR2E1Q9Y466 385 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.09■□□□□ 0.97
LETM1-201ENST00000302787 SMIM35A0A1B0GVV1 85 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 PTSQ03393 145 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 SAPCD2Q86UD0 394 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 AMER2Q8N7J2 671 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 ADCY4Q8NFM4 1077 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 GRHL1Q9NZI5 618 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 ZNF624Q9P2J8 865 aaPredicted RBP21.09■□□□□ 0.97
LETM1-201ENST00000302787 MAGEL2Q9UJ55 1249 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 CAMTA1Q9Y6Y1 1673 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 NPEPPSL1A6NEC2 478 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 TIPRLO75663 272 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 IPO13O94829 963 aaKnown RBP21.09■□□□□ 0.97
LETM1-201ENST00000302787 TDRPQ86YL5 185 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 DEPDC4Q8N2C3 294 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 KLRG1Q96E93 195 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 CCDC28BQ9BUN5 200 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 OSBPL6Q9BZF3 934 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 AGO3Q9H9G7 860 aaKnown RBP21.09■□□□□ 0.97
LETM1-201ENST00000302787 FAM151BQ6UXP7 276 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 UXS1Q8NBZ7 420 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 PDZD7Q9H5P4 517 aa21.09■□□□□ 0.97
LETM1-201ENST00000302787 NOL11Q9H8H0 719 aaKnown RBP21.09■□□□□ 0.97
LETM1-201ENST00000302787 SAMHD1Q9Y3Z3 626 aaKnown RBP21.09■□□□□ 0.97
LETM1-201ENST00000302787 MDM4O15151 490 aa21.08■□□□□ 0.97
LETM1-201ENST00000302787 UMPSP11172 480 aa21.08■□□□□ 0.97
LETM1-201ENST00000302787 RPL3P39023 403 aaKnown RBP21.08■□□□□ 0.97
LETM1-201ENST00000302787 NPY5RQ15761 445 aa21.08■□□□□ 0.97
LETM1-201ENST00000302787 RBFAQ8N0V3 343 aa21.08■□□□□ 0.97
LETM1-201ENST00000302787 CXorf40AQ8TE69 158 aa21.08■□□□□ 0.97
LETM1-201ENST00000302787 ZNF558Q96NG5 402 aa21.08■□□□□ 0.97
LETM1-201ENST00000302787 GBA3Q9H227 469 aa21.08■□□□□ 0.97
LETM1-201ENST00000302787 ACSS2Q9NR19 701 aa21.08■□□□□ 0.97
LETM1-201ENST00000302787 CRNNQ9UBG3 495 aaPredicted RBP21.08■□□□□ 0.97
LETM1-201ENST00000302787 A0A088AWK7 358 aa21.08■□□□□ 0.97
LETM1-201ENST00000302787 A0A1W2PQH9 124 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms