RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 CATSPERZQ9NTU4 200 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.34■■□□□ 1.17
SMAD1-201ENST00000302085 DPP7Q9UHL4 492 aa22.34■■□□□ 1.17
SMAD1-201ENST00000302085 A0A0U1RQS6 177 aa22.33■■□□□ 1.17
SMAD1-201ENST00000302085 MYO1CO00159 1063 aa22.33■■□□□ 1.17
SMAD1-201ENST00000302085 SERPINE1P05121 402 aa22.33■■□□□ 1.17
SMAD1-201ENST00000302085 PRSS56P0CW18 603 aa22.33■■□□□ 1.17
SMAD1-201ENST00000302085 LPOP22079 712 aaPredicted RBP22.33■■□□□ 1.17
SMAD1-201ENST00000302085 SLC12A2P55011 1212 aa22.33■■□□□ 1.17
SMAD1-201ENST00000302085 HECTD2Q5U5R9 776 aa22.33■■□□□ 1.17
SMAD1-201ENST00000302085 MRNIPQ6NTE8 343 aa22.33■■□□□ 1.17
SMAD1-201ENST00000302085 ADGRG2Q8IZP9 1017 aa22.33■■□□□ 1.17
SMAD1-201ENST00000302085 SPATA6LQ8N4H0 392 aa22.33■■□□□ 1.17
SMAD1-201ENST00000302085 OR6Y1Q8NGX8 325 aa22.33■■□□□ 1.17
SMAD1-201ENST00000302085 PIH1D2Q8WWB5 315 aa22.33■■□□□ 1.17
SMAD1-201ENST00000302085 TNKS2Q9H2K2 1166 aa22.33■■□□□ 1.17
SMAD1-201ENST00000302085 SPHK2Q9NRA0 654 aa22.33■■□□□ 1.17
SMAD1-201ENST00000302085 TBC1D14Q9P2M4 693 aa22.33■■□□□ 1.17
SMAD1-201ENST00000302085 VWA7Q9Y334 891 aa22.33■■□□□ 1.17
SMAD1-201ENST00000302085 MRPS23Q9Y3D9 190 aaKnown RBP22.33■■□□□ 1.17
SMAD1-201ENST00000302085 A0A087X1B8 175 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.32■■□□□ 1.16
SMAD1-201ENST00000302085 HGSO14964 777 aaPredicted RBP22.32■■□□□ 1.16
SMAD1-201ENST00000302085 PGLSO95336 258 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 RALBP11234 206 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 TCF3P15923 654 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 GKP32189 559 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 STK19P49842 368 aaPredicted RBP22.32■■□□□ 1.16
SMAD1-201ENST00000302085 ARMC12Q5T9G4 340 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 ATG14Q6ZNE5 492 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 TSNARE1Q96NA8 513 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 CPSF2Q9P2I0 782 aaKnown RBP22.32■■□□□ 1.16
SMAD1-201ENST00000302085 CRYL1Q9Y2S2 319 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 WNT6Q9Y6F9 365 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 TRAFD1O14545 582 aaPredicted RBP22.32■■□□□ 1.16
SMAD1-201ENST00000302085 LYPLA1O75608 230 aaPredicted RBP22.32■■□□□ 1.16
SMAD1-201ENST00000302085 KLHL2O95198 593 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 SLC4A1P02730 911 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 APOA4P06727 396 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 SRCP12931 536 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 BMP1P13497 986 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 MAGEA10P43363 369 aaPredicted RBP22.32■■□□□ 1.16
SMAD1-201ENST00000302085 GLRBP48167 497 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 SLC1A6P48664 564 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 ITGA9Q13797 1035 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 LY6G5CQ5SRR4 150 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 ZNF549Q6P9A3 640 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 METTL3Q86U44 580 aaKnown RBP22.32■■□□□ 1.16
SMAD1-201ENST00000302085 SMG7Q92540 1137 aaKnown RBP22.32■■□□□ 1.16
SMAD1-201ENST00000302085 MYO19Q96H55 970 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 PIDD1Q9HB75 910 aa22.32■■□□□ 1.16
SMAD1-201ENST00000302085 A0A0G2JND7 137 aa22.31■■□□□ 1.16
SMAD1-201ENST00000302085 CXorf51AA0A1B0GTR3 108 aa22.31■■□□□ 1.16
SMAD1-201ENST00000302085 TARM1B6A8C7 271 aa22.31■■□□□ 1.16
SMAD1-201ENST00000302085 HTRA2O43464 458 aaPredicted RBP22.31■■□□□ 1.16
SMAD1-201ENST00000302085 PIGNO95427 931 aa22.31■■□□□ 1.16
SMAD1-201ENST00000302085 TYRP14679 529 aa22.31■■□□□ 1.16
SMAD1-201ENST00000302085 OGNP20774 298 aaKnown RBP22.31■■□□□ 1.16
SMAD1-201ENST00000302085 GRK2P25098 689 aa22.31■■□□□ 1.16
SMAD1-201ENST00000302085 ARRB2P32121 409 aa22.31■■□□□ 1.16
SMAD1-201ENST00000302085 SCTRP47872 440 aa22.31■■□□□ 1.16
SMAD1-201ENST00000302085 LIG3P49916 1009 aa22.31■■□□□ 1.16
SMAD1-201ENST00000302085 CDKN2DP55273 166 aa22.31■■□□□ 1.16
SMAD1-201ENST00000302085 ACTN3Q08043 901 aaPredicted RBP22.31■■□□□ 1.16
SMAD1-201ENST00000302085 CCDC15Q0P6D6 951 aa22.31■■□□□ 1.16
SMAD1-201ENST00000302085 SDCCAG8Q86SQ7 713 aaPredicted RBP22.31■■□□□ 1.16
SMAD1-201ENST00000302085 FSTL5Q8N475 847 aaPredicted RBP22.31■■□□□ 1.16
SMAD1-201ENST00000302085 VOPP1Q96AW1 172 aa22.31■■□□□ 1.16
SMAD1-201ENST00000302085 SCYL1Q96KG9 808 aa22.31■■□□□ 1.16
SMAD1-201ENST00000302085 LRRC3BQ96PB8 259 aa22.31■■□□□ 1.16
SMAD1-201ENST00000302085 TLE6Q9H808 572 aa22.31■■□□□ 1.16
SMAD1-201ENST00000302085 IGSF5Q9NSI5 407 aa22.31■■□□□ 1.16
SMAD1-201ENST00000302085 ZMYM5Q9UJ78 669 aa22.31■■□□□ 1.16
SMAD1-201ENST00000302085 SLC12A4Q9UP95 1085 aa22.31■■□□□ 1.16
SMAD1-201ENST00000302085 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.3■■□□□ 1.16
SMAD1-201ENST00000302085 CTPS1P17812 591 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 ARFIP2P53365 341 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 EPHB1P54762 984 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 BCL2L1Q07817 233 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 TYSND1Q2T9J0 566 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 LRRC8EQ6NSJ5 796 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 AFTPHQ6ULP2 937 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 ZYG11AQ6WRX3 759 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 CRLF3Q8IUI8 442 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 HEXDCQ8WVB3 486 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 TSPAN17Q96FV3 270 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 TMEM120AQ9BXJ8 343 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 MYLK2Q9H1R3 596 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 ACTR5Q9H9F9 607 aaPredicted RBP22.3■■□□□ 1.16
SMAD1-201ENST00000302085 BPIFA1Q9NP55 256 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 POLR3BQ9NW08 1133 aaPredicted RBP22.3■■□□□ 1.16
SMAD1-201ENST00000302085 HACD3Q9P035 362 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 HS3ST2Q9Y278 367 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 TK2O00142 265 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 IGSF6O95976 241 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 PABPC1P11940 636 aaKnown RBP22.3■■□□□ 1.16
SMAD1-201ENST00000302085 MAPK8P45983 427 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 STC1P52823 247 aa22.3■■□□□ 1.16
SMAD1-201ENST00000302085 HSF5Q4G112 596 aaPredicted RBP22.3■■□□□ 1.16
SMAD1-201ENST00000302085 NAPRTQ6XQN6 538 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms