RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 LDB2O43679 373 aa13.66□□□□□ -0.22
BCCIP-202ENST00000299130 GPC4O75487 556 aa13.66□□□□□ -0.22
BCCIP-202ENST00000299130 ATXN1LP0C7T5 689 aaKnown RBP13.66□□□□□ -0.22
BCCIP-202ENST00000299130 PIRTP0C851 137 aa13.66□□□□□ -0.22
BCCIP-202ENST00000299130 IMPDH1P20839 514 aa13.66□□□□□ -0.22
BCCIP-202ENST00000299130 INHBCP55103 352 aa13.66□□□□□ -0.22
BCCIP-202ENST00000299130 SH3BP2P78314 561 aa13.66□□□□□ -0.22
BCCIP-202ENST00000299130 MAPRE1Q15691 268 aaKnown RBP13.66□□□□□ -0.22
BCCIP-202ENST00000299130 UGT3A2Q3SY77 523 aa13.66□□□□□ -0.22
BCCIP-202ENST00000299130 KLC3Q6P597 504 aa13.66□□□□□ -0.22
BCCIP-202ENST00000299130 LARP4Q71RC2 724 aaKnown RBP eCLIP13.66□□□□□ -0.22
BCCIP-202ENST00000299130 FUNDC1Q8IVP5 155 aa13.66□□□□□ -0.22
BCCIP-202ENST00000299130 SLC45A3Q96JT2 553 aa13.66□□□□□ -0.22
BCCIP-202ENST00000299130 C1orf74Q96LT6 269 aa13.66□□□□□ -0.22
BCCIP-202ENST00000299130 SERPINB11Q96P15 392 aa13.66□□□□□ -0.22
BCCIP-202ENST00000299130 PPP1R2P1Q96PQ5 205 aa13.66□□□□□ -0.22
BCCIP-202ENST00000299130 GMIPQ9P107 970 aa13.66□□□□□ -0.22
BCCIP-202ENST00000299130 SUCOQ9UBS9 1254 aaKnown RBP13.66□□□□□ -0.22
BCCIP-202ENST00000299130 CD300AQ9UGN4 299 aa13.66□□□□□ -0.22
BCCIP-202ENST00000299130 BCAP29Q9UHQ4 241 aa13.66□□□□□ -0.22
BCCIP-202ENST00000299130 SARDHQ9UL12 918 aa13.66□□□□□ -0.22
BCCIP-202ENST00000299130 TLR6Q9Y2C9 796 aa13.66□□□□□ -0.22
BCCIP-202ENST00000299130 C9JVG2 144 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 MRASO14807 208 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 MUSKO15146 869 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 VILLO15195 856 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 SOAT2O75908 522 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 SIX3O95343 332 aaPredicted RBP13.65□□□□□ -0.22
BCCIP-202ENST00000299130 C8BP07358 591 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 SNRPB2P08579 225 aaKnown RBP13.65□□□□□ -0.22
BCCIP-202ENST00000299130 PRSS56P0CW18 603 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 PSMD8P48556 350 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 TBX4P57082 545 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 YBX1P67809 324 aaKnown RBP13.65□□□□□ -0.22
BCCIP-202ENST00000299130 NRG1Q02297 640 aaPredicted RBP13.65□□□□□ -0.22
BCCIP-202ENST00000299130 EFEMP1Q12805 493 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 STX5Q13190 355 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 C6orf10Q5SRN2 563 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 RETREG3Q86VR2 466 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 RYBPQ8N488 228 aaPredicted RBP13.65□□□□□ -0.22
BCCIP-202ENST00000299130 KLHDC9Q8NEP7 349 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 PIP4K2CQ8TBX8 421 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 CCDC126Q96EE4 140 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 FAR2Q96K12 515 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 PRPF18Q99633 342 aaKnown RBP13.65□□□□□ -0.22
BCCIP-202ENST00000299130 GRIP2Q9C0E4 1043 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 MFSD1Q9H3U5 465 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 COQ10BQ9H8M1 238 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 SP110Q9HB58 689 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 AP4S1Q9Y587 144 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 ACTL7AQ9Y615 435 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 ARL5AQ9Y689 179 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 SLC7A4O43246 635 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 CLPTM1O96005 669 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 HMBSP08397 361 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 ACVRL1P37023 503 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 FOXA1P55317 472 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 PRAMEP78395 509 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 LSAMPQ13449 338 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 SLC5A9Q2M3M2 681 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 NADK2Q4G0N4 442 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 RAP1GAP2Q684P5 730 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 HMBOX1Q6NT76 420 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 FBXL22Q6P050 247 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 C17orf99Q6UX52 265 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 RBM44Q6ZP01 1051 aaKnown RBP13.65□□□□□ -0.22
BCCIP-202ENST00000299130 AMIGO2Q86SJ2 522 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 CATSPER1Q8NEC5 780 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 TSPAN17Q96FV3 270 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 NSUN5Q96P11 429 aaKnown RBP13.65□□□□□ -0.22
BCCIP-202ENST00000299130 SLC29A1Q99808 456 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 SLC2A11Q9BYW1 496 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 ZYG11BQ9C0D3 744 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 Q9H521 79 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 RGS18Q9NS28 235 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 DOCK4Q8N1I0 1966 aa13.65□□□□□ -0.22
BCCIP-202ENST00000299130 A0A1B0GTL3 188 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 PAPSS2O95340 614 aaPredicted RBP13.64□□□□□ -0.23
BCCIP-202ENST00000299130 RHOQP17081 205 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 NDST2P52849 883 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 FKBP1BP68106 108 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 TRIM32Q13049 653 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 OR4D1Q15615 310 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 FBXO48Q5FWF7 155 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 C8orf82Q6P1X6 216 aaPredicted RBP13.64□□□□□ -0.23
BCCIP-202ENST00000299130 MIB1Q86YT6 1006 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 LRRC49Q8IUZ0 686 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 OR13C4Q8NGS5 318 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 EME1Q96AY2 570 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 DNAJC1Q96KC8 554 aaKnown RBP13.64□□□□□ -0.23
BCCIP-202ENST00000299130 TMEM248Q9NWD8 314 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 RNF11Q9Y3C5 154 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 SLC4A7Q9Y6M7 1214 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 H3BMM5 538 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 UBXN8O00124 270 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 NRP2O60462 931 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 TRPA1O75762 1119 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 GOT2P00505 430 aaKnown RBP13.64□□□□□ -0.23
BCCIP-202ENST00000299130 CD1DP15813 335 aa13.64□□□□□ -0.23
BCCIP-202ENST00000299130 NELFEP18615 380 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms