RNA–Protein interactions for RNA: ENST00000296181.8

ITGB5-201, Transcript of integrin subunit beta 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB5, Length 4,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-201ENST00000296181 SCAMP3O14828 347 aaKnown RBP18.47■□□□□ 0.55
ITGB5-201ENST00000296181 SLC22A3O75751 556 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 NTRK1P04629 796 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 S100A3P33764 101 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 SOX6P35712 828 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 SLC11A2P49281 568 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 BNIP3Q12983 259 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 PPIL2Q13356 520 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 NCBP2-AS2Q69YL0 99 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 ZNF540Q8NDQ6 660 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 MTERF3Q96E29 417 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 APOL4Q9BPW4 351 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 GBA3Q9H227 469 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 RCOR3Q9P2K3 495 aaPredicted RBP18.47■□□□□ 0.55
ITGB5-201ENST00000296181 H3BMM5 538 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 J3QRK9 145 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 PABPC4LP0CB38 370 aaKnown RBP18.47■□□□□ 0.55
ITGB5-201ENST00000296181 ADSLP30566 484 aaPredicted RBP18.47■□□□□ 0.55
ITGB5-201ENST00000296181 PIK3CGP48736 1102 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 RPL38P63173 70 aaKnown RBP18.47■□□□□ 0.55
ITGB5-201ENST00000296181 ENPEPQ07075 957 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 FSCN1Q16658 493 aaKnown RBP18.47■□□□□ 0.55
ITGB5-201ENST00000296181 PRAMEF19Q5SWL8 479 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 STXBP5Q5T5C0 1151 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 SYPL2Q5VXT5 272 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 SLCO6A1Q86UG4 719 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 FBXL8Q96CD0 374 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 ABHD8Q96I13 439 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 ZFP42Q96MM3 310 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 PNPLA8Q9NP80 782 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 SERPIND1P05546 499 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 IDO1P14902 403 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 HDCP19113 662 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 GALNT3Q14435 633 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 SPANXN2Q5MJ10 180 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 RAP1GAP2Q684P5 730 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 EPGNQ6UW88 154 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 NAT16Q8N8M0 369 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 ELMO1Q92556 727 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 LPPQ93052 612 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 CENPNQ96H22 339 aaPredicted RBP18.47■□□□□ 0.55
ITGB5-201ENST00000296181 SERPINB11Q96P15 392 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 SMAD5Q99717 465 aaKnown RBP18.47■□□□□ 0.55
ITGB5-201ENST00000296181 TRMOQ9BU70 441 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 STRA6Q9BX79 667 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 POLR1EQ9GZS1 481 aaKnown RBP18.47■□□□□ 0.55
ITGB5-201ENST00000296181 CYTH4Q9UIA0 394 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 NWD2Q9ULI1 1742 aa18.47■□□□□ 0.55
ITGB5-201ENST00000296181 COL14A1Q05707 1796 aaKnown RBP18.47■□□□□ 0.55
ITGB5-201ENST00000296181 DLX3O60479 287 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 CELF2O95319 508 aaKnown RBP18.46■□□□□ 0.55
ITGB5-201ENST00000296181 PIGRP01833 764 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 KRT6AP02538 564 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 KRT6BP04259 564 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 MTHFD1P11586 935 aaKnown RBP18.46■□□□□ 0.55
ITGB5-201ENST00000296181 GCAP28676 217 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 MZF1P28698 734 aaPredicted RBP18.46■□□□□ 0.55
ITGB5-201ENST00000296181 ALDH4A1P30038 563 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 KRT6CP48668 564 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 ZNF157P51786 506 aaPredicted RBP18.46■□□□□ 0.55
ITGB5-201ENST00000296181 SFSWAPQ12872 951 aaKnown RBP18.46■□□□□ 0.55
ITGB5-201ENST00000296181 MRPL28Q13084 256 aaKnown RBP18.46■□□□□ 0.55
ITGB5-201ENST00000296181 SIM2Q14190 667 aaPredicted RBP18.46■□□□□ 0.55
ITGB5-201ENST00000296181 CNSTQ6PJW8 725 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 FAM35AQ86V20 835 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 CPSF7Q8N684 471 aaKnown RBP18.46■□□□□ 0.55
ITGB5-201ENST00000296181 TWIST2Q8WVJ9 160 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 TBATAQ96M53 351 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 CRYBG1Q9Y4K1 1723 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 PDHXO00330 501 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 FOXD2O60548 495 aaPredicted RBP18.46■□□□□ 0.55
ITGB5-201ENST00000296181 YWHAQP27348 245 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 OGFOD2Q6N063 350 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 NANOGNBQ7Z5D8 188 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 SVOPQ8N4V2 548 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 CNGB3Q9NQW8 809 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 SH3BP4Q9P0V3 963 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 COQ6Q9Y2Z9 468 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 CAB39Q9Y376 341 aaPredicted RBP18.46■□□□□ 0.55
ITGB5-201ENST00000296181 AKAP11Q9UKA4 1901 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 KCNH1O95259 989 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 RHOCP08134 193 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 HTRA1Q92743 480 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 FZD8Q9H461 694 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 CACNA2D2Q9NY47 1150 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 OAZ3Q9UMX2 235 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 CNTN6Q9UQ52 1028 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 SNX8Q9Y5X2 465 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 NUP98P52948 1817 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 ENTPD1P49961 510 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 HPCAP84074 193 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 SYTL3Q4VX76 610 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 DRAXINQ8NBI3 349 aaPredicted RBP18.46■□□□□ 0.55
ITGB5-201ENST00000296181 ATP13A1Q9HD20 1204 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 GMPPBQ9Y5P6 360 aa18.46■□□□□ 0.55
ITGB5-201ENST00000296181 GNG14A0A1W2PPG7 69 aa18.45■□□□□ 0.54
ITGB5-201ENST00000296181 PPEF2O14830 753 aa18.45■□□□□ 0.54
ITGB5-201ENST00000296181 RAD51BO15315 384 aa18.45■□□□□ 0.54
ITGB5-201ENST00000296181 EPHX2P34913 555 aa18.45■□□□□ 0.54
ITGB5-201ENST00000296181 SEPHS1P49903 392 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms