RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 FUT4P22083 530 aa16.17■□□□□ 0.18
SSRP1-202ENST00000293880 RPS12P25398 132 aaKnown RBP16.17■□□□□ 0.18
SSRP1-202ENST00000293880 TGFB2P61812 414 aa16.17■□□□□ 0.18
SSRP1-202ENST00000293880 CNTN2Q02246 1040 aa16.17■□□□□ 0.18
SSRP1-202ENST00000293880 MAP1SQ66K74 1059 aaPredicted RBP16.17■□□□□ 0.18
SSRP1-202ENST00000293880 RETSATQ6NUM9 610 aa16.17■□□□□ 0.18
SSRP1-202ENST00000293880 GPRIN3Q6ZVF9 776 aa16.17■□□□□ 0.18
SSRP1-202ENST00000293880 BRD9Q9H8M2 597 aa16.17■□□□□ 0.18
SSRP1-202ENST00000293880 BLOC1S4Q9NUP1 217 aa16.17■□□□□ 0.18
SSRP1-202ENST00000293880 NCOA3Q9Y6Q9 1424 aa16.17■□□□□ 0.18
SSRP1-202ENST00000293880 STX11O75558 287 aa16.17■□□□□ 0.18
SSRP1-202ENST00000293880 ERAL1O75616 437 aaKnown RBP16.17■□□□□ 0.18
SSRP1-202ENST00000293880 PTPN1P18031 435 aaKnown RBP16.17■□□□□ 0.18
SSRP1-202ENST00000293880 TRPV3Q8NET8 790 aa16.17■□□□□ 0.18
SSRP1-202ENST00000293880 MORF4L1Q9UBU8 362 aa16.17■□□□□ 0.18
SSRP1-202ENST00000293880 CNOT6Q9ULM6 557 aaKnown RBP16.17■□□□□ 0.18
SSRP1-202ENST00000293880 RBM7Q9Y580 266 aaKnown RBP16.17■□□□□ 0.18
SSRP1-202ENST00000293880 GSAPA4D1B5 854 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 H3BMM5 538 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 KDM4BO94953 1096 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 SERPINA6P08185 405 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 TIMM50Q3ZCQ8 353 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 CEP295NLQ96MC4 621 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 ASB2Q96Q27 587 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 SP140LQ9H930 580 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 KCNQ5Q9NR82 932 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 NR1H2P55055 460 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 STXBP1P61764 594 aaKnown RBP16.16■□□□□ 0.18
SSRP1-202ENST00000293880 DEFA5Q01523 94 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 SLC9A4Q6AI14 798 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 CRTC3Q6UUV7 619 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 KBTBD8Q8NFY9 601 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 GAL3ST3Q96A11 431 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 TCF12Q99081 682 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 TPK1Q9H3S4 243 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 ADGRE2Q9UHX3 823 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 PNPLA6Q8IY17 1366 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 GJB1P08034 283 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 ITGA2BP08514 1039 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 NPR3P17342 541 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 TAS2R40P59535 323 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 CXXC5Q7LFL8 322 aaKnown RBP16.16■□□□□ 0.18
SSRP1-202ENST00000293880 COX4I2Q96KJ9 171 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 TDRD1Q9BXT4 1180 aaKnown RBP16.16■□□□□ 0.18
SSRP1-202ENST00000293880 ZCCHC2Q9C0B9 1178 aaKnown RBP16.16■□□□□ 0.18
SSRP1-202ENST00000293880 XPR1Q9UBH6 696 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 RPH3AQ9Y2J0 694 aaPredicted RBP16.16■□□□□ 0.18
SSRP1-202ENST00000293880 CTSEP14091 401 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 ZNHIT3Q15649 155 aaPredicted RBP16.16■□□□□ 0.18
SSRP1-202ENST00000293880 CPSF6Q16630 551 aaKnown RBP eCLIP16.16■□□□□ 0.18
SSRP1-202ENST00000293880 VWA5B1Q5TIE3 1220 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 SYNPOQ8N3V7 929 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 C12orf29Q8N999 325 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 Q96MT0 163 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 WDR55Q9H6Y2 383 aaPredicted RBP16.16■□□□□ 0.18
SSRP1-202ENST00000293880 VPS51Q9UID3 782 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 COMMD3-BMI1R4GMX3 469 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 PPRC1Q5VV67 1664 aaKnown RBP16.16■□□□□ 0.18
SSRP1-202ENST00000293880 KDM4FA0A1W2PPD8 638 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 SCNN1GP51170 649 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 LIPMQ5VYY2 423 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 AFTPHQ6ULP2 937 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 FAM124AQ86V42 546 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 FAM47BQ8NA70 645 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 STARD8Q92502 1023 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 COPS5Q92905 334 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 TMX2Q9Y320 296 aa16.16■□□□□ 0.18
SSRP1-202ENST00000293880 GTPBP1O00178 669 aaKnown RBP16.15■□□□□ 0.18
SSRP1-202ENST00000293880 GRB14Q14449 540 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 SUZ12Q15022 739 aaKnown RBP16.15■□□□□ 0.18
SSRP1-202ENST00000293880 PHF12Q96QT6 1004 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 ABCC13Q9NSE7 274 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 TRIM64CA6NLI5 447 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 CCNCP24863 283 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 SHMT1P34896 483 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 SWI5Q1ZZU3 235 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 FBXO42Q6P3S6 717 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 GALNT18Q6P9A2 607 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 AMER2Q8N7J2 671 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 PTCD3Q96EY7 689 aaKnown RBP16.15■□□□□ 0.18
SSRP1-202ENST00000293880 ADARB2Q9NS39 739 aaKnown RBP16.15■□□□□ 0.18
SSRP1-202ENST00000293880 THG1LQ9NWX6 298 aaKnown RBP16.15■□□□□ 0.18
SSRP1-202ENST00000293880 CPS1P31327 1500 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 FAM149AA5PLN7 773 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 STX16-NPEPL1H3BU86 382 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 STX16O14662 325 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 MAP2K7O14733 419 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 CBFA2T3O75081 653 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 RECQL4O94761 1208 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 ITPKAP23677 461 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 MAZP56270 477 aaKnown RBP16.15■□□□□ 0.18
SSRP1-202ENST00000293880 PRAMEF19Q5SWL8 479 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 ZC3H10Q96K80 434 aaKnown RBP16.15■□□□□ 0.18
SSRP1-202ENST00000293880 RACGAP1Q9H0H5 632 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 RIOX1Q9H6W3 641 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 MCIDASD6RGH6 385 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 SERPINA4P29622 427 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 ALDH4A1P30038 563 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 PPP4CP60510 307 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 SNAP47Q5SQN1 464 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms