RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 VWA7Q9Y334 891 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 FAM32AQ9Y421 112 aaKnown RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 PCDHB12Q9Y5F1 795 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 SCN7AQ01118 1682 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 H3BMM5 538 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 SEPT4O43236 478 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 DNAJA2O60884 412 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 ALPIP09923 528 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 PSME3P61289 254 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 GRIK3Q13003 919 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 KCTD21Q4G0X4 260 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 TIGD2Q4W5G0 525 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 FNDC3BQ53EP0 1204 aaKnown RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 RBM20Q5T481 1227 aaKnown RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 RRM2BQ7LG56 351 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 GALNT5Q7Z7M9 940 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 RASAL3Q86YV0 1011 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 PHTF2Q8N3S3 785 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 CATSPER1Q8NEC5 780 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 CMASQ8NFW8 434 aaPredicted RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 SPPL2AQ8TCT8 520 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 SLC35F5Q8WV83 523 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 GLMNQ92990 594 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 VPS33AQ96AX1 596 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 LRRC39Q96DD0 335 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 CCDC126Q96EE4 140 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 C12orf42Q96LP6 360 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 HIPK3Q9H422 1215 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 RIBC2Q9H4K1 309 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 SYTL2Q9HCH5 934 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 ZDHHC4Q9NPG8 344 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 GIT1Q9Y2X7 761 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 A0A087X1B8 175 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 OR2AG2A6NM03 316 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 MGEA5O60502 916 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 CNTN5O94779 1100 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 ZNF37AP17032 561 aaPredicted RBP4.79□□□□□ -1.64
UBR1-201ENST00000290650 PRKAG1P54619 331 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 OCA2Q04671 838 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 LSM12Q3MHD2 195 aaKnown RBP4.79□□□□□ -1.64
UBR1-201ENST00000290650 ACSBG2Q5FVE4 666 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 STXBP5Q5T5C0 1151 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 EMC10Q5UCC4 262 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 C14orf80Q86SX3 495 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 SETD3Q86TU7 594 aaPredicted RBP4.79□□□□□ -1.64
UBR1-201ENST00000290650 FAM120BQ96EK7 910 aaKnown RBP4.79□□□□□ -1.64
UBR1-201ENST00000290650 KCNA7Q96RP8 456 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 STRA6Q9BX79 667 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 CRTAC1Q9NQ79 661 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 TRPC4Q9UBN4 977 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 PTGDR2Q9Y5Y4 395 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 ACTL7BQ9Y614 415 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 TEX264Q9Y6I9 313 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 TRBV23OR9-2A0A075B6M9 112 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 RGSL1A5PLK6 1076 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 NBNO60934 754 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 GCATO75600 419 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 STATHP02808 62 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 CYP2C18P33260 490 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 GJA5P36382 358 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 RAP1GDS1P52306 607 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 TAS2R39P59534 338 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 FOLH1Q04609 750 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 ATP1A4Q13733 1029 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 MFSD4BQ5TF39 518 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 CRTC3Q6UUV7 619 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 ANKS3Q6ZW76 656 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 FAM124AQ86V42 546 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 CLVS1Q8IUQ0 354 aaPredicted RBP4.79□□□□□ -1.64
UBR1-201ENST00000290650 PLD3Q8IV08 490 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 PHACTR4Q8IZ21 702 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 TTC9BQ8N6N2 239 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 MAGEC3Q8TD91 643 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 ELMO1Q92556 727 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 GATA5Q9BWX5 397 aaPredicted RBP4.79□□□□□ -1.64
UBR1-201ENST00000290650 CDH22Q9UJ99 828 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 TRAF6Q9Y4K3 522 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 NRAPQ86VF7 1730 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 ARAP2Q8WZ64 1704 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 SHANK3Q9BYB0 1731 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 SCN1AP35498 2009 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 HDAC3O15379 428 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 FGF10O15520 208 aaPredicted RBP4.79□□□□□ -1.64
UBR1-201ENST00000290650 KPNA6O60684 536 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 ITGB1P05556 798 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 SNRPB2P08579 225 aaKnown RBP4.79□□□□□ -1.64
UBR1-201ENST00000290650 GSTM1P09488 218 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 IGFBP6P24592 240 aaPredicted RBP4.79□□□□□ -1.64
UBR1-201ENST00000290650 GPC1P35052 558 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 CDK18Q07002 472 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 KLF10Q13118 480 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 KCNJ11Q14654 390 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 TTLL9Q3SXZ7 439 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 ARHGAP15Q53QZ3 475 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 SLC9A4Q6AI14 798 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 LRRC8DQ7L1W4 858 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 LPCAT2Q7L5N7 544 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 LZICQ8WZA0 190 aa4.79□□□□□ -1.64
UBR1-201ENST00000290650 FCRL3Q96P31 734 aaPredicted RBP4.79□□□□□ -1.64
UBR1-201ENST00000290650 SMOQ99835 787 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms