RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 RAB44Q7Z6P3 723 aaPredicted RBP20.53■□□□□ 0.88
RAB28-201ENST00000288723 RBFAQ8N0V3 343 aa20.53■□□□□ 0.88
RAB28-201ENST00000288723 PELI3Q8N2H9 469 aa20.53■□□□□ 0.88
RAB28-201ENST00000288723 EXD1Q8NHP7 514 aa20.53■□□□□ 0.88
RAB28-201ENST00000288723 AGAP3Q96P47 875 aa20.53■□□□□ 0.88
RAB28-201ENST00000288723 TDRD1Q9BXT4 1180 aaKnown RBP20.53■□□□□ 0.88
RAB28-201ENST00000288723 ENC1O14682 589 aa20.53■□□□□ 0.88
RAB28-201ENST00000288723 SIGLEC6O43699 453 aa20.53■□□□□ 0.88
RAB28-201ENST00000288723 HEXIM1O94992 359 aaKnown RBP20.53■□□□□ 0.88
RAB28-201ENST00000288723 TRIM16O95361 564 aa20.53■□□□□ 0.88
RAB28-201ENST00000288723 PRLP01236 227 aa20.53■□□□□ 0.88
RAB28-201ENST00000288723 MMP2P08253 660 aa20.53■□□□□ 0.88
RAB28-201ENST00000288723 NME1P15531 152 aaKnown RBP20.53■□□□□ 0.88
RAB28-201ENST00000288723 JUNDP17535 347 aa20.53■□□□□ 0.88
RAB28-201ENST00000288723 CES1P23141 567 aa20.53■□□□□ 0.88
RAB28-201ENST00000288723 CTNNA1P35221 906 aaKnown RBP20.53■□□□□ 0.88
RAB28-201ENST00000288723 HNF1BP35680 557 aa20.53■□□□□ 0.88
RAB28-201ENST00000288723 HNRNPKP61978 463 aaKnown RBP eCLIP20.53■□□□□ 0.88
RAB28-201ENST00000288723 PTK2BQ14289 1009 aa20.53■□□□□ 0.88
RAB28-201ENST00000288723 HSD11B1LQ7Z5J1 315 aa20.53■□□□□ 0.88
RAB28-201ENST00000288723 LRRC57Q8N9N7 239 aa20.53■□□□□ 0.88
RAB28-201ENST00000288723 ADAMTS14Q8WXS8 1223 aa20.53■□□□□ 0.88
RAB28-201ENST00000288723 RBM41Q96IZ5 413 aaKnown RBP20.53■□□□□ 0.88
RAB28-201ENST00000288723 COQ10AQ96MF6 247 aa20.53■□□□□ 0.88
RAB28-201ENST00000288723 APOOQ9BUR5 198 aa20.53■□□□□ 0.88
RAB28-201ENST00000288723 HAUS2Q9NVX0 235 aa20.53■□□□□ 0.88
RAB28-201ENST00000288723 PCDHA3Q9Y5H8 950 aa20.53■□□□□ 0.88
RAB28-201ENST00000288723 AKAP13Q12802 2813 aa20.52■□□□□ 0.88
RAB28-201ENST00000288723 GIMD1P0DJR0 217 aa20.52■□□□□ 0.88
RAB28-201ENST00000288723 CYP2A6P11509 494 aaPredicted RBP20.52■□□□□ 0.88
RAB28-201ENST00000288723 ETV3P41162 512 aa20.52■□□□□ 0.88
RAB28-201ENST00000288723 NR2C2P49116 596 aa20.52■□□□□ 0.88
RAB28-201ENST00000288723 EPHB1P54762 984 aa20.52■□□□□ 0.88
RAB28-201ENST00000288723 USP45Q70EL2 814 aa20.52■□□□□ 0.88
RAB28-201ENST00000288723 ZC3H18Q86VM9 953 aaKnown RBP20.52■□□□□ 0.88
RAB28-201ENST00000288723 P3H4Q92791 437 aa20.52■□□□□ 0.88
RAB28-201ENST00000288723 MCCC1Q96RQ3 725 aaPredicted RBP20.52■□□□□ 0.88
RAB28-201ENST00000288723 HERPUD2Q9BSE4 406 aa20.52■□□□□ 0.88
RAB28-201ENST00000288723 PPIL1Q9Y3C6 166 aa20.52■□□□□ 0.88
RAB28-201ENST00000288723 ARID1BQ8NFD5 2236 aaPredicted RBP20.52■□□□□ 0.88
RAB28-201ENST00000288723 ASPMQ8IZT6 3477 aa20.52■□□□□ 0.87
RAB28-201ENST00000288723 GOLGA6L6A8MZA4 724 aa20.51■□□□□ 0.87
RAB28-201ENST00000288723 K7ESM1 405 aa20.51■□□□□ 0.87
RAB28-201ENST00000288723 TGM2P21980 687 aa20.51■□□□□ 0.87
RAB28-201ENST00000288723 SKOR1P84550 965 aa20.51■□□□□ 0.87
RAB28-201ENST00000288723 KIF5AQ12840 1032 aa20.51■□□□□ 0.87
RAB28-201ENST00000288723 C1orf61Q13536 156 aa20.51■□□□□ 0.87
RAB28-201ENST00000288723 ENPP7Q6UWV6 458 aa20.51■□□□□ 0.87
RAB28-201ENST00000288723 MACC1Q6ZN28 852 aa20.51■□□□□ 0.87
RAB28-201ENST00000288723 ZNF548Q8NEK5 533 aaPredicted RBP20.51■□□□□ 0.87
RAB28-201ENST00000288723 LPCAT1Q8NF37 534 aa20.51■□□□□ 0.87
RAB28-201ENST00000288723 LMX1AQ8TE12 382 aa20.51■□□□□ 0.87
RAB28-201ENST00000288723 CALR3Q96L12 384 aaKnown RBP20.51■□□□□ 0.87
RAB28-201ENST00000288723 RBM15Q96T37 977 aaKnown RBP eCLIP20.51■□□□□ 0.87
RAB28-201ENST00000288723 PCDH9Q9HC56 1237 aa20.51■□□□□ 0.87
RAB28-201ENST00000288723 SCAMP1O15126 338 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 MYF5P13349 255 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 MTM1Q13496 603 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 PRKD1Q15139 912 aaPredicted RBP20.5■□□□□ 0.87
RAB28-201ENST00000288723 TCEA2Q15560 299 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 KCTD16Q68DU8 428 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 AADACL2Q6P093 401 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 CRTC1Q6UUV9 634 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 RFLNAQ6ZTI6 216 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 KDELC2Q7Z4H8 507 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 PHACTR4Q8IZ21 702 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 CBARPQ8N350 705 aaPredicted RBP20.5■□□□□ 0.87
RAB28-201ENST00000288723 OR4C6Q8NH72 309 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 TFB1MQ8WVM0 346 aaKnown RBP20.5■□□□□ 0.87
RAB28-201ENST00000288723 TSACCQ96A04 125 aaPredicted RBP20.5■□□□□ 0.87
RAB28-201ENST00000288723 NUS1Q96E22 293 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 BRD8Q9H0E9 1235 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 APOBEC3BQ9UH17 382 aaKnown RBP20.5■□□□□ 0.87
RAB28-201ENST00000288723 TPRP12270 2363 aaKnown RBP20.5■□□□□ 0.87
RAB28-201ENST00000288723 A0A0J9YYE9 177 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 H3BM21 787 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 TOR1BO14657 336 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 DKK1O94907 266 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 TRBC1P01850 177 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 NFKBIAP25963 317 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 PEX5P50542 639 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 ZNF211Q13398 564 aaPredicted RBP20.5■□□□□ 0.87
RAB28-201ENST00000288723 ARHGEF7Q14155 803 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 NFATC4Q14934 902 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 FAXCQ5TGI0 409 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 LRRC66Q68CR7 880 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 DHRS13Q6UX07 377 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 Q6ZVL8 140 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 BZW1Q7L1Q6 419 aaKnown RBP20.5■□□□□ 0.87
RAB28-201ENST00000288723 RD3Q7Z3Z2 195 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 NT5DC3Q86UY8 548 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 MARCH9Q86YJ5 346 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 NDUFAF2Q8N183 169 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 ALG3Q92685 438 aa20.5■□□□□ 0.87
RAB28-201ENST00000288723 FUBP1Q96AE4 644 aaKnown RBP20.5■□□□□ 0.87
RAB28-201ENST00000288723 PACSIN2Q9UNF0 486 aaPredicted RBP20.5■□□□□ 0.87
RAB28-201ENST00000288723 COL5A1P20908 1838 aaPredicted RBP20.49■□□□□ 0.87
RAB28-201ENST00000288723 ACACBO00763 2458 aa20.49■□□□□ 0.87
RAB28-201ENST00000288723 GCATO75600 419 aa20.49■□□□□ 0.87
RAB28-201ENST00000288723 PTPN3P26045 913 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms