RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 NEMP1O14524 444 aa18.39■□□□□ 0.54
PDLIM3-201ENST00000284767 GJB5O95377 273 aa18.39■□□□□ 0.54
PDLIM3-201ENST00000284767 EFEMP2O95967 443 aa18.39■□□□□ 0.54
PDLIM3-201ENST00000284767 CD1EP15812 388 aa18.39■□□□□ 0.54
PDLIM3-201ENST00000284767 NMBRP28336 390 aa18.39■□□□□ 0.54
PDLIM3-201ENST00000284767 HADHAP40939 763 aa18.39■□□□□ 0.54
PDLIM3-201ENST00000284767 MS4A2Q01362 244 aa18.39■□□□□ 0.54
PDLIM3-201ENST00000284767 SLC8B1Q6J4K2 584 aa18.39■□□□□ 0.54
PDLIM3-201ENST00000284767 ZYG11AQ6WRX3 759 aa18.39■□□□□ 0.54
PDLIM3-201ENST00000284767 BTN2A3PQ96KV6 586 aa18.39■□□□□ 0.54
PDLIM3-201ENST00000284767 RPRD1AQ96P16 312 aaPredicted RBP18.39■□□□□ 0.54
PDLIM3-201ENST00000284767 ZYG11BQ9C0D3 744 aa18.39■□□□□ 0.54
PDLIM3-201ENST00000284767 CDYLQ9Y232 598 aa18.39■□□□□ 0.54
PDLIM3-201ENST00000284767 ANKRD6Q9Y2G4 727 aa18.39■□□□□ 0.54
PDLIM3-201ENST00000284767 COL4A6Q14031 1691 aa18.39■□□□□ 0.53
PDLIM3-201ENST00000284767 HNRNPRO43390 633 aaKnown RBP18.39■□□□□ 0.53
PDLIM3-201ENST00000284767 CHRNGP07510 517 aa18.39■□□□□ 0.53
PDLIM3-201ENST00000284767 SLC2A3P11169 496 aa18.39■□□□□ 0.53
PDLIM3-201ENST00000284767 EPHA3P29320 983 aa18.39■□□□□ 0.53
PDLIM3-201ENST00000284767 ART3Q13508 389 aa18.39■□□□□ 0.53
PDLIM3-201ENST00000284767 MYBPC3Q14896 1274 aa18.39■□□□□ 0.53
PDLIM3-201ENST00000284767 C6orf52Q5T4I8 152 aa18.39■□□□□ 0.53
PDLIM3-201ENST00000284767 IYDQ6PHW0 289 aa18.39■□□□□ 0.53
PDLIM3-201ENST00000284767 PABPC5Q96DU9 382 aaKnown RBP18.39■□□□□ 0.53
PDLIM3-201ENST00000284767 DNAJC1Q96KC8 554 aaKnown RBP18.39■□□□□ 0.53
PDLIM3-201ENST00000284767 CATSPER2Q96P56 530 aa18.39■□□□□ 0.53
PDLIM3-201ENST00000284767 GRID2O43424 1007 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 PEX11BO96011 259 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 ENO3P13929 434 aaPredicted RBP18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 CHRNA4P43681 627 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 PKNOX1P55347 436 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 POU6F1Q14863 301 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 PCSK7Q16549 785 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 ATP6V0D2Q8N8Y2 350 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 PSMG2Q969U7 264 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 ZNF512Q96ME7 567 aaPredicted RBP18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 FICDQ9BVA6 458 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 MRPL1Q9BYD6 325 aaKnown RBP18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 ACE2Q9BYF1 805 aaPredicted RBP18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 CAB39LQ9H9S4 337 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 ZBTB26Q9HCK0 441 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 ACOT8O14734 319 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 CFLARO15519 480 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 GJB3O75712 270 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 ZDHHC11BP0C7U3 371 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 CCDC166P0CW27 439 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 TFEBP19484 476 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 DNAJB2P25686 324 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 GRIA4P48058 902 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 CDKL1Q00532 357 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 NRG1Q02297 640 aaPredicted RBP18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 SLC10A7Q0GE19 358 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 GK3PQ14409 553 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 PRPSAP1Q14558 356 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 DLG2Q15700 870 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 TMEM102Q8N9M5 508 aaPredicted RBP18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 HAUS8Q9BT25 410 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 MCMBPQ9BTE3 642 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 LMCD1Q9NZU5 365 aa18.38■□□□□ 0.53
PDLIM3-201ENST00000284767 ERI2A8K979 691 aaKnown RBP18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 SCAMP3O14828 347 aaKnown RBP18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 CACNG3O60359 315 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 PIGNO95427 931 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 RHOQP17081 205 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 HTR7P34969 479 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 PGGT1BP53609 377 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 CDH17Q12864 832 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 MPP3Q13368 585 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 TOX2Q96NM4 488 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 FCRL5Q96RD9 977 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 DDX18Q9NVP1 670 aaKnown RBP18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 EPS15L1Q9UBC2 864 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 IGLV3-27P01718 113 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 ACRP10323 421 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 CSF2RAP15509 400 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 ZNF33AQ06730 810 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 NSUN2Q08J23 767 aaKnown RBP eCLIP18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 IHHQ14623 411 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 ARL13AQ5H913 290 aaPredicted RBP18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 CNKSR3Q6P9H4 555 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 RNF168Q8IYW5 571 aaPredicted RBP18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 UMODL1-AS1Q8N2C9 162 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 USP13Q92995 863 aaPredicted RBP18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 TSNARE1Q96NA8 513 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 TBL1YQ9BQ87 522 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 NUF2Q9BZD4 464 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 NT5MQ9NPB1 228 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 OLA1Q9NTK5 396 aaKnown RBP18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 TMEM248Q9NWD8 314 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 MAGEB16A2A368 324 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 WASH4PA8MWX3 477 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 CDK4P11802 303 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 PSMC3P17980 439 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 ACVRL1P37023 503 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 ETFBP38117 255 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 DPP6P42658 865 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 CSRP3P50461 194 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 ANO4Q32M45 955 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 NAPEPLDQ6IQ20 393 aa18.37■□□□□ 0.53
PDLIM3-201ENST00000284767 DENND5AQ6IQ26 1287 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms