RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 PDCD11Q14690 1871 aaKnown RBP27.56■■■□□ 2
CBX4-201ENST00000269397 GABRDO14764 452 aa27.56■■■□□ 2
CBX4-201ENST00000269397 CAPN3P20807 821 aa27.56■■■□□ 2
CBX4-201ENST00000269397 CCNCP24863 283 aa27.56■■■□□ 2
CBX4-201ENST00000269397 PPIL2Q13356 520 aa27.56■■■□□ 2
CBX4-201ENST00000269397 PMS2P3Q13401 168 aa27.56■■■□□ 2
CBX4-201ENST00000269397 KIAA0930Q6ICG6 404 aaPredicted RBP27.56■■■□□ 2
CBX4-201ENST00000269397 LZTR1Q8N653 840 aa27.56■■■□□ 2
CBX4-201ENST00000269397 OR52K2Q8NGK3 314 aa27.56■■■□□ 2
CBX4-201ENST00000269397 CCDC126Q96EE4 140 aa27.56■■■□□ 2
CBX4-201ENST00000269397 SENP8Q96LD8 212 aa27.56■■■□□ 2
CBX4-201ENST00000269397 PTGESO14684 152 aa27.55■■■□□ 2
CBX4-201ENST00000269397 F9P00740 461 aa27.55■■■□□ 2
CBX4-201ENST00000269397 MT-ND1P03886 318 aa27.55■■■□□ 2
CBX4-201ENST00000269397 MTHFD1P11586 935 aaKnown RBP27.55■■■□□ 2
CBX4-201ENST00000269397 AFF1P51825 1210 aaKnown RBP27.55■■■□□ 2
CBX4-201ENST00000269397 CDKN2DP55273 166 aa27.55■■■□□ 2
CBX4-201ENST00000269397 GRB7Q14451 532 aa27.55■■■□□ 2
CBX4-201ENST00000269397 HECTD2Q5U5R9 776 aa27.55■■■□□ 2
CBX4-201ENST00000269397 ANKRD23Q86SG2 305 aa27.55■■■□□ 2
CBX4-201ENST00000269397 SLC15A3Q8IY34 581 aa27.55■■■□□ 2
CBX4-201ENST00000269397 PCYOX1LQ8NBM8 494 aa27.55■■■□□ 2
CBX4-201ENST00000269397 GFM2Q969S9 779 aaKnown RBP27.55■■■□□ 2
CBX4-201ENST00000269397 NAA50Q9GZZ1 169 aaKnown RBP27.55■■■□□ 2
CBX4-201ENST00000269397 CXorf21Q9HAI6 301 aa27.55■■■□□ 2
CBX4-201ENST00000269397 BOLA2-SMG1P6H3BVE0 249 aa27.55■■■□□ 2
CBX4-201ENST00000269397 GIPC1O14908 333 aa27.55■■■□□ 2
CBX4-201ENST00000269397 SIX3O95343 332 aaPredicted RBP27.55■■■□□ 2
CBX4-201ENST00000269397 SLC4A1P02730 911 aa27.55■■■□□ 2
CBX4-201ENST00000269397 YAP1P46937 504 aaKnown RBP27.55■■■□□ 2
CBX4-201ENST00000269397 MAPK10P53779 464 aa27.55■■■□□ 2
CBX4-201ENST00000269397 FOXA1P55317 472 aa27.55■■■□□ 2
CBX4-201ENST00000269397 SH3BP2P78314 561 aa27.55■■■□□ 2
CBX4-201ENST00000269397 KCTD21Q4G0X4 260 aa27.55■■■□□ 2
CBX4-201ENST00000269397 DHRS4L2Q6PKH6 230 aa27.55■■■□□ 2
CBX4-201ENST00000269397 VPS45Q9NRW7 570 aa27.55■■■□□ 2
CBX4-201ENST00000269397 CLEC11AQ9Y240 323 aa27.55■■■□□ 2
CBX4-201ENST00000269397 OTOFQ9HC10 1997 aa27.55■■■□□ 2
CBX4-201ENST00000269397 SH3PXD2BA1X283 911 aa27.54■■■□□ 2
CBX4-201ENST00000269397 OR51F1A6NGY5 319 aa27.54■■■□□ 2
CBX4-201ENST00000269397 APLP1P51693 650 aa27.54■■■□□ 2
CBX4-201ENST00000269397 GEMP55040 296 aa27.54■■■□□ 2
CBX4-201ENST00000269397 SMG8Q8ND04 991 aaKnown RBP27.54■■■□□ 2
CBX4-201ENST00000269397 OR6J1Q8NGC5 347 aa27.54■■■□□ 2
CBX4-201ENST00000269397 KCNA7Q96RP8 456 aa27.54■■■□□ 2
CBX4-201ENST00000269397 IL12RB2Q99665 862 aa27.54■■■□□ 2
CBX4-201ENST00000269397 NPLQ9BXD5 320 aaPredicted RBP27.54■■■□□ 2
CBX4-201ENST00000269397 AGPAT4Q9NRZ5 378 aa27.54■■■□□ 2
CBX4-201ENST00000269397 NEU3Q9UQ49 428 aa27.54■■■□□ 2
CBX4-201ENST00000269397 DNAJC15Q9Y5T4 150 aa27.54■■■□□ 2
CBX4-201ENST00000269397 SNAI1O95863 264 aaPredicted RBP27.54■■■□□ 2
CBX4-201ENST00000269397 RBP1P09455 135 aa27.54■■■□□ 2
CBX4-201ENST00000269397 IMPDH1P20839 514 aa27.54■■■□□ 2
CBX4-201ENST00000269397 MYF6P23409 242 aa27.54■■■□□ 2
CBX4-201ENST00000269397 RANBP10Q6VN20 620 aa27.54■■■□□ 2
CBX4-201ENST00000269397 LYSMD3Q7Z3D4 306 aa27.54■■■□□ 2
CBX4-201ENST00000269397 RBM12BQ8IXT5 1001 aaKnown RBP27.54■■■□□ 2
CBX4-201ENST00000269397 PLEKHG4BQ96PX9 1271 aa27.54■■■□□ 2
CBX4-201ENST00000269397 VTA1Q9NP79 307 aa27.54■■■□□ 2
CBX4-201ENST00000269397 ENTPD7Q9NQZ7 604 aa27.54■■■□□ 2
CBX4-201ENST00000269397 CMTM6Q9NX76 183 aa27.54■■■□□ 2
CBX4-201ENST00000269397 CRYL1Q9Y2S2 319 aa27.54■■■□□ 2
CBX4-201ENST00000269397 A0A1W2PPW3 197 aa27.54■■■□□ 2
CBX4-201ENST00000269397 TTC24A2A3L6 582 aaPredicted RBP27.54■■■□□ 2
CBX4-201ENST00000269397 ATP6V1G1O75348 118 aa27.54■■■□□ 2
CBX4-201ENST00000269397 SNX17Q15036 470 aa27.54■■■□□ 2
CBX4-201ENST00000269397 ZNF792Q3KQV3 632 aa27.54■■■□□ 2
CBX4-201ENST00000269397 UNC50Q53HI1 259 aa27.54■■■□□ 2
CBX4-201ENST00000269397 RAB41Q5JT25 222 aa27.54■■■□□ 2
CBX4-201ENST00000269397 ZNF678Q5SXM1 525 aa27.54■■■□□ 2
CBX4-201ENST00000269397 KLHDC8BQ8IXV7 354 aa27.54■■■□□ 2
CBX4-201ENST00000269397 SMYD1Q8NB12 490 aa27.54■■■□□ 2
CBX4-201ENST00000269397 OR6P1Q8NGX9 317 aa27.54■■■□□ 2
CBX4-201ENST00000269397 DQX1Q8TE96 717 aaKnown RBP27.54■■■□□ 2
CBX4-201ENST00000269397 UBXN10Q96LJ8 280 aa27.54■■■□□ 2
CBX4-201ENST00000269397 GPATCH1Q9BRR8 931 aaKnown RBP27.54■■■□□ 2
CBX4-201ENST00000269397 V9GYQ6 96 aa27.54■■■□□ 2
CBX4-201ENST00000269397 HHLA1C9JL84 531 aa27.53■■■□□ 2
CBX4-201ENST00000269397 EI24O14681 340 aa27.53■■■□□ 2
CBX4-201ENST00000269397 CD247P20963 164 aa27.53■■■□□ 2
CBX4-201ENST00000269397 MAXP61244 160 aa27.53■■■□□ 2
CBX4-201ENST00000269397 NAA20P61599 178 aa27.53■■■□□ 2
CBX4-201ENST00000269397 XKR5Q6UX68 686 aa27.53■■■□□ 2
CBX4-201ENST00000269397 HACD2Q6Y1H2 254 aa27.53■■■□□ 2
CBX4-201ENST00000269397 TMEM26Q6ZUK4 368 aa27.53■■■□□ 2
CBX4-201ENST00000269397 FASTKD5Q7L8L6 764 aaKnown RBP27.53■■■□□ 2
CBX4-201ENST00000269397 DDIASQ8IXT1 998 aa27.53■■■□□ 2
CBX4-201ENST00000269397 MFSD2AQ8NA29 543 aa27.53■■■□□ 2
CBX4-201ENST00000269397 GIPC3Q8TF64 312 aa27.53■■■□□ 2
CBX4-201ENST00000269397 PAIP1Q9H074 479 aaKnown RBP27.53■■■□□ 2
CBX4-201ENST00000269397 NUDT5Q9UKK9 219 aa27.53■■■□□ 2
CBX4-201ENST00000269397 MATN3O15232 486 aa27.53■■■□□ 2
CBX4-201ENST00000269397 NCK1P16333 377 aa27.53■■■□□ 2
CBX4-201ENST00000269397 IL10P22301 178 aa27.53■■■□□ 2
CBX4-201ENST00000269397 FASP25445 335 aa27.53■■■□□ 2
CBX4-201ENST00000269397 PSMA4P25789 261 aaKnown RBP27.53■■■□□ 2
CBX4-201ENST00000269397 IREB2P48200 963 aaKnown RBP27.53■■■□□ 2
CBX4-201ENST00000269397 PSMD7P51665 324 aa27.53■■■□□ 2
CBX4-201ENST00000269397 WNT3AP56704 352 aa27.53■■■□□ 2
CBX4-201ENST00000269397 ACAP2Q15057 778 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms