RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 GSTA5Q7RTV2 222 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 HSD11B1LQ7Z5J1 315 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 KLHDC8BQ8IXV7 354 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 CBARPQ8N350 705 aaPredicted RBP12.79□□□□□ -0.36
SS18-202ENST00000269138 CCDC89Q8N998 374 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 ATL2Q8NHH9 583 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 FAM122AQ96E09 287 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 KLF6Q99612 283 aaPredicted RBP12.79□□□□□ -0.36
SS18-202ENST00000269138 HINFPQ9BQA5 517 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 ETNK1Q9HBU6 452 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 MBNL1Q9NR56 388 aaKnown RBP12.79□□□□□ -0.36
SS18-202ENST00000269138 AASDHPPTQ9NRN7 309 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 SPO11Q9Y5K1 396 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 DOCK9Q9BZ29 2069 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 TNRC6BQ9UPQ9 1833 aaKnown RBP12.79□□□□□ -0.36
SS18-202ENST00000269138 USP34Q70CQ2 3546 aa12.79□□□□□ -0.36
SS18-202ENST00000269138 A0A1B0GTW7 788 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 A0A1W2PR77 199 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 H0Y8X5 98 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 LZTS3O60299 673 aaPredicted RBP12.78□□□□□ -0.36
SS18-202ENST00000269138 PHF2O75151 1096 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 USP12O75317 370 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 RECQL5O94762 991 aaPredicted RBP12.78□□□□□ -0.36
SS18-202ENST00000269138 CLDN7O95471 211 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 EPOP01588 193 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 GNSP15586 552 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 IRX4P78413 519 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 BNC1Q01954 994 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 ACOX1Q15067 660 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 SLC1A5Q15758 541 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 DUOXA1Q1HG43 343 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 TRIM61Q5EBN2 209 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 LRRC66Q68CR7 880 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 KCTD11Q693B1 232 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 NAPEPLDQ6IQ20 393 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 CCDC137Q6PK04 289 aaKnown RBP12.78□□□□□ -0.36
SS18-202ENST00000269138 RANBP10Q6VN20 620 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 NDUFAF2Q8N183 169 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 PDCD7Q8N8D1 485 aaKnown RBP12.78□□□□□ -0.36
SS18-202ENST00000269138 TMEM145Q8NBT3 493 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 COQ10AQ96MF6 247 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 DDX47Q9H0S4 455 aaKnown RBP12.78□□□□□ -0.36
SS18-202ENST00000269138 SEMA4GQ9NTN9 838 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 TPX2Q9ULW0 747 aaKnown RBP12.78□□□□□ -0.36
SS18-202ENST00000269138 DMTF1Q9Y222 760 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 AAR2Q9Y312 384 aaKnown RBP12.78□□□□□ -0.36
SS18-202ENST00000269138 EP300Q09472 2414 aaPredicted RBP12.78□□□□□ -0.36
SS18-202ENST00000269138 WDR87Q6ZQQ6 2873 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 TRPM6Q9BX84 2022 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 GOLGA6L10A0A0M3HER8 536 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 A0A1B0GVT2 93 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 PRAMEF26H0Y7S4 382 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 C1SP09871 688 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 ZNF806P0C7X5 589 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 HNRNPA2B1P22626 353 aaKnown RBP12.78□□□□□ -0.36
SS18-202ENST00000269138 AKT2P31751 481 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 HOXD12P35452 270 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 NUDT1P36639 197 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 PLA2G5P39877 138 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 RACK1P63244 317 aaKnown RBP12.78□□□□□ -0.36
SS18-202ENST00000269138 PTSQ03393 145 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 ARHGEF7Q14155 803 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 WSCD2Q2TBF2 565 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 DENND5AQ6IQ26 1287 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 CCDC70Q6NSX1 233 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 GCNT7Q6ZNI0 430 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 Q6ZVL8 140 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 LYSMD3Q7Z3D4 306 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 TP53I13Q8NBR0 393 aaPredicted RBP12.78□□□□□ -0.36
SS18-202ENST00000269138 ASB12Q8WXK4 309 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 ZNF592Q92610 1267 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 CENPTQ96BT3 561 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 EID2BQ96D98 161 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 BMFQ96LC9 184 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 LENG8Q96PV6 779 aaPredicted RBP12.78□□□□□ -0.36
SS18-202ENST00000269138 LYSMD1Q96S90 227 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 TBL1YQ9BQ87 522 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 FSD1LQ9BXM9 530 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 CAPN10Q9HC96 672 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 RAB6BQ9NRW1 208 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 PAK5Q9P286 719 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 SUSD2Q9UGT4 822 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 SHOC2Q9UQ13 582 aa12.78□□□□□ -0.36
SS18-202ENST00000269138 FRYLO94915 3013 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 C1orf232A0A0U1RR37 186 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 POM121BA6NF01 834 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 AURKAO14965 403 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 KHNYNO15037 678 aaKnown RBP12.77□□□□□ -0.37
SS18-202ENST00000269138 KRT14P02533 472 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 NFKBIAP25963 317 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 CD38P28907 300 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 ACTN2P35609 894 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 IGFALSP35858 605 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 FDFT1P37268 417 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 ETV3P41162 512 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 DPP6P42658 865 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 PAFAH1B1P43034 410 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 VPS41P49754 854 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 AFF3P51826 1226 aaKnown RBP12.77□□□□□ -0.37
SS18-202ENST00000269138 STC1P52823 247 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms