RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 PABPC1P11940 636 aaKnown RBP14.02□□□□□ -0.16
CDH3-201ENST00000264012 CXCR2P25025 360 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 HOXD13P35453 343 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 LIMK2P53671 638 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 NRF1Q16656 503 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 CYP20A1Q6UW02 462 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 OR7D4Q8NG98 312 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 TBATAQ96M53 351 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 TWNKQ96RR1 684 aa14.02□□□□□ -0.16
CDH3-201ENST00000264012 HBS1LQ9Y450 684 aaKnown RBP14.02□□□□□ -0.16
CDH3-201ENST00000264012 GUCY1B2O75343 617 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 MT-CYBP00156 380 aaPredicted RBP14.02□□□□□ -0.17
CDH3-201ENST00000264012 MPSTP25325 297 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 PSMB9P28065 219 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 SEMA5AQ13591 1074 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 XKR6Q5GH73 641 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 NLNQ9BYT8 704 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 RIBC2Q9H4K1 309 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 WDR55Q9H6Y2 383 aaPredicted RBP14.02□□□□□ -0.17
CDH3-201ENST00000264012 BRD9Q9H8M2 597 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 ENTPD4Q9Y227 616 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 KRT8P05787 483 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 ELFN1P0C7U0 828 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 RXRGP48443 463 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 GRM3Q14832 879 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 NCF4Q15080 339 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 CCDC157Q569K6 752 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 LINGO4Q6UY18 593 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 PLEKHM3Q6ZWE6 761 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 TERB1Q8NA31 727 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 SETD9Q8NE22 299 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 SPOCK2Q92563 424 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 APOL4Q9BPW4 351 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 ARMC7Q9H6L4 198 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 EVLQ9UI08 416 aaPredicted RBP14.02□□□□□ -0.17
CDH3-201ENST00000264012 RPL26L1Q9UNX3 145 aaKnown RBP14.02□□□□□ -0.17
CDH3-201ENST00000264012 KLHL20Q9Y2M5 609 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 TCAF1Q9Y4C2 921 aa14.02□□□□□ -0.17
CDH3-201ENST00000264012 A0A1B0GVM2 712 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 TCAF2A6NFQ2 919 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 SLC28A1O00337 649 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 FAM20BO75063 409 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 CFHP08603 1231 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 IGFBP4P22692 258 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 DPYSL2Q16555 572 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 LPCAT2Q7L5N7 544 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 CAMK1DQ8IU85 385 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 CHPFQ8IZ52 775 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 LRRC15Q8TF66 581 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 PROX1Q92786 737 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 NXNL1Q96CM4 212 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 MAPRE3Q9UPY8 281 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 KCNE2Q9Y6J6 123 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 IPO13O94829 963 aaKnown RBP14.01□□□□□ -0.17
CDH3-201ENST00000264012 INHAP05111 366 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 PTDSS1P48651 473 aaKnown RBP14.01□□□□□ -0.17
CDH3-201ENST00000264012 SLC44A4Q53GD3 710 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 ZNF572Q7Z3I7 529 aaPredicted RBP14.01□□□□□ -0.17
CDH3-201ENST00000264012 ULK2Q8IYT8 1036 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 HMCESQ96FZ2 354 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 NMUR2Q9GZQ4 415 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 RNF39Q9H2S5 420 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.01□□□□□ -0.17
CDH3-201ENST00000264012 PRKAG3Q9UGI9 489 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 TBC1D30Q9Y2I9 924 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 GRM6O15303 877 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 ADH1CP00326 375 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 UGT2B4P06133 528 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 IDO1P14902 403 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 SERPINB1P30740 379 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 PBX3P40426 434 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 CRATP43155 626 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 MPP1Q00013 466 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 HNRNPDQ14103 355 aaKnown RBP14.01□□□□□ -0.17
CDH3-201ENST00000264012 TRIP4Q15650 581 aaPredicted RBP14.01□□□□□ -0.17
CDH3-201ENST00000264012 FAM46CQ5VWP2 391 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 GCNT7Q6ZNI0 430 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 OTOP2Q7RTS6 562 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 ANKS1BQ7Z6G8 1248 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 CLNKQ7Z7G1 428 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 LDB1Q86U70 411 aaPredicted RBP14.01□□□□□ -0.17
CDH3-201ENST00000264012 TDRPQ86YL5 185 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 ADHFE1Q8IWW8 467 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 CDK20Q8IZL9 346 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 SCAMP5Q8TAC9 235 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 TLCD1Q96CP7 247 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 PTCD3Q96EY7 689 aaKnown RBP14.01□□□□□ -0.17
CDH3-201ENST00000264012 MAGEH1Q9H213 219 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 ARL8BQ9NVJ2 186 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 LTBP3Q9NS15 1303 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 CDH4P55283 916 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 C1DQ13901 141 aaKnown RBP14.01□□□□□ -0.17
CDH3-201ENST00000264012 CLEC20AQ6ZU45 233 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 CIR1Q86X95 450 aaPredicted RBP14.01□□□□□ -0.17
CDH3-201ENST00000264012 IFNL1Q8IU54 200 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 PLEKHO2Q8TD55 490 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 STYXQ8WUJ0 223 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 OR8D1Q8WZ84 308 aa14.01□□□□□ -0.17
CDH3-201ENST00000264012 SMAD5Q99717 465 aaKnown RBP14.01□□□□□ -0.17
CDH3-201ENST00000264012 REEP1Q9H902 201 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms