RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 SPRTNQ9H040 489 aaPredicted RBP10.79□□□□□ -0.68
CD44-201ENST00000263398 C8orf4Q9NR00 106 aa10.79□□□□□ -0.68
CD44-201ENST00000263398 CORO2BQ9UQ03 480 aa10.79□□□□□ -0.68
CD44-201ENST00000263398 A0A0J9YYE9 177 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.78□□□□□ -0.68
CD44-201ENST00000263398 A8MUI8 341 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 GCATO75600 419 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 ITGA2P17301 1181 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 ADSLP30566 484 aaPredicted RBP10.78□□□□□ -0.68
CD44-201ENST00000263398 ICAM3P32942 547 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 INHBEP58166 350 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 DPYSQ14117 519 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 PSMD5Q16401 504 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 PMF1Q6P1K2 205 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 KIAA0408Q6ZU52 694 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 EIF3MQ7L2H7 374 aaKnown RBP10.78□□□□□ -0.68
CD44-201ENST00000263398 RBFAQ8N0V3 343 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 FAM47BQ8NA70 645 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 KLHL5Q96PQ7 755 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 COPS8Q99627 209 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 FTHL17Q9BXU8 183 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 THG1LQ9NWX6 298 aaKnown RBP10.78□□□□□ -0.68
CD44-201ENST00000263398 DNAJC28Q9NX36 388 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 FETUBQ9UGM5 382 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 MAGEL2Q9UJ55 1249 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 MCM8Q9UJA3 840 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 PCDHB9Q9Y5E1 797 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 PGK1P00558 417 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 PPM1LQ5SGD2 360 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 PROSER1Q86XN7 944 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 HJURPQ8NCD3 748 aaPredicted RBP10.78□□□□□ -0.68
CD44-201ENST00000263398 ZNF540Q8NDQ6 660 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 FAXDC2Q96IV6 333 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 C12orf65Q9H3J6 166 aaKnown RBP10.78□□□□□ -0.68
CD44-201ENST00000263398 CHRAC1Q9NRG0 131 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 ZNHIT2Q9UHR6 403 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 MAFBQ9Y5Q3 323 aaPredicted RBP10.78□□□□□ -0.68
CD44-201ENST00000263398 CAPN8A6NHC0 703 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 PDE9AO76083 593 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 SEC24AO95486 1093 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 UNGP13051 313 aaPredicted RBP10.78□□□□□ -0.68
CD44-201ENST00000263398 CD52P31358 61 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 MSX2P35548 267 aaPredicted RBP10.78□□□□□ -0.68
CD44-201ENST00000263398 BRCC3P46736 316 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 TAB1Q15750 504 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 ARL13AQ5H913 290 aaPredicted RBP10.78□□□□□ -0.68
CD44-201ENST00000263398 KHDRBS2Q5VWX1 349 aaKnown RBP10.78□□□□□ -0.68
CD44-201ENST00000263398 LPCAT4Q643R3 524 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 ZNF57Q68EA5 555 aaPredicted RBP10.78□□□□□ -0.68
CD44-201ENST00000263398 MACC1Q6ZN28 852 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 DSELQ8IZU8 1212 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 CNTD1Q8N815 330 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 TFAP2BQ92481 460 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 REXO5Q96IC2 774 aaKnown RBP10.78□□□□□ -0.68
CD44-201ENST00000263398 PANX1Q96RD7 426 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 ARHGEF4Q9NR80 690 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 COL20A1Q9P218 1284 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 CDH22Q9UJ99 828 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 SAMHD1Q9Y3Z3 626 aaKnown RBP10.78□□□□□ -0.68
CD44-201ENST00000263398 KCNE2Q9Y6J6 123 aa10.78□□□□□ -0.68
CD44-201ENST00000263398 CHD2O14647 1828 aaKnown RBP10.78□□□□□ -0.68
CD44-201ENST00000263398 C2orf71A6NGG8 1288 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 MOXD2PA6NHM9 499 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 OR6C75A6NL08 312 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 FOXO6A8MYZ6 492 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 GPR25O00155 361 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 RFXANKO14593 260 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 PRMT5O14744 637 aaPredicted RBP10.77□□□□□ -0.68
CD44-201ENST00000263398 MGRN1O60291 552 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 CD48P09326 243 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 NTSP30990 170 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 SMAD3P84022 425 aaKnown RBP10.77□□□□□ -0.68
CD44-201ENST00000263398 PFKPQ01813 784 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 SPIRE1Q08AE8 756 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 STX4Q12846 297 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 GNA13Q14344 377 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 EML3Q32P44 896 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 PGAM4Q8N0Y7 254 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 USP7Q93009 1102 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 MYDGFQ969H8 173 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 TRIM63Q969Q1 353 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 OR52E6Q96RD3 313 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 KCTD15Q96SI1 283 aaPredicted RBP10.77□□□□□ -0.68
CD44-201ENST00000263398 NFKBIZQ9BYH8 718 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 CCNB1IP1Q9NPC3 277 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 XPNPEP1Q9NQW7 623 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 STXBP5LQ9Y2K9 1186 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 CNTNAP1P78357 1384 aa10.77□□□□□ -0.68
CD44-201ENST00000263398 TRIM43BA6NCK2 446 aa10.77□□□□□ -0.69
CD44-201ENST00000263398 C2CD4BA6NLJ0 364 aa10.77□□□□□ -0.69
CD44-201ENST00000263398 SLC9A3R1O14745 358 aaPredicted RBP10.77□□□□□ -0.69
CD44-201ENST00000263398 MC4RP32245 332 aa10.77□□□□□ -0.69
CD44-201ENST00000263398 HTR7P34969 479 aa10.77□□□□□ -0.69
CD44-201ENST00000263398 GALNT3Q14435 633 aa10.77□□□□□ -0.69
CD44-201ENST00000263398 HECTD2Q5U5R9 776 aa10.77□□□□□ -0.69
CD44-201ENST00000263398 SH3BP5LQ7L8J4 393 aa10.77□□□□□ -0.69
CD44-201ENST00000263398 KBTBD8Q8NFY9 601 aa10.77□□□□□ -0.69
CD44-201ENST00000263398 OR2T12Q8NG77 320 aa10.77□□□□□ -0.69
CD44-201ENST00000263398 SPPL2BQ8TCT7 592 aa10.77□□□□□ -0.69
CD44-201ENST00000263398 NELL1Q92832 810 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms