RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 NFKBIBQ15653 356 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 SMTNL2Q2TAL5 461 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 ZFYVE27Q5T4F4 411 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 PHF19Q5T6S3 580 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 PLEKHA7Q6IQ23 1121 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 LIPIQ6XZB0 460 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 DPPA4Q7L190 304 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 PLA2G15Q8NCC3 412 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 NUS1Q96E22 293 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 PDXPQ96GD0 296 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 PRR11Q96HE9 360 aaPredicted RBP12.29□□□□□ -0.44
TRAF4-202ENST00000262396 ZNF599Q96NL3 588 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 ARHGAP9Q9BRR9 750 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 CARS2Q9HA77 564 aaKnown RBP12.29□□□□□ -0.44
TRAF4-202ENST00000262396 RTN4Q9NQC3 1192 aaKnown RBP12.29□□□□□ -0.44
TRAF4-202ENST00000262396 KCTD5Q9NXV2 234 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 LRIT1Q9P2V4 623 aa12.29□□□□□ -0.44
TRAF4-202ENST00000262396 FASNP49327 2511 aaKnown RBP12.29□□□□□ -0.44
TRAF4-202ENST00000262396 TMEM202A6NGA9 273 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 D6RAR5 112 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 GZMAP12544 262 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 GLB1P16278 677 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 RGRP47804 291 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 MAPK10P53779 464 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 EPHB1P54762 984 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 AMZ1Q400G9 498 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 BOLA3Q53S33 107 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 CCDC122Q5T0U0 273 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 TMEM164Q5U3C3 297 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 MARC1Q5VT66 337 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 RAET1GQ6H3X3 334 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 PNCKQ6P2M8 343 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 IGF2-ASQ6U949 168 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 ARHGAP36Q6ZRI8 547 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 USP53Q70EK8 1073 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 USP45Q70EL2 814 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 ZSWIM9Q86XI8 627 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 ZSCAN1Q8NBB4 408 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 FNIP1Q8TF40 1166 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 OR1E3Q8WZA6 343 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 FUBP1Q96AE4 644 aaKnown RBP12.28□□□□□ -0.44
TRAF4-202ENST00000262396 LIN37Q96GY3 246 aaPredicted RBP12.28□□□□□ -0.44
TRAF4-202ENST00000262396 CCNL2Q96S94 520 aaPredicted RBP12.28□□□□□ -0.44
TRAF4-202ENST00000262396 PEBP4Q96S96 227 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 RBM15Q96T37 977 aaKnown RBP eCLIP12.28□□□□□ -0.442e-9■■■■□ 25.4
TRAF4-202ENST00000262396 CMKLR1Q99788 373 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 GSDMCQ9BYG8 508 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 MRPL40Q9NQ50 206 aaKnown RBP12.28□□□□□ -0.44
TRAF4-202ENST00000262396 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRAF4-202ENST00000262396 CWC15Q9P013 229 aaKnown RBP12.28□□□□□ -0.44
TRAF4-202ENST00000262396 B4GALT6Q9UBX8 382 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 PNMA8BQ9ULN7 279 aaPredicted RBP12.28□□□□□ -0.44
TRAF4-202ENST00000262396 LOXL2Q9Y4K0 774 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 TTLL3Q9Y4R7 772 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 PCDHGC4Q9Y5F7 938 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 DGKBQ9Y6T7 804 aa12.28□□□□□ -0.44
TRAF4-202ENST00000262396 TTC24A2A3L6 582 aaPredicted RBP12.27□□□□□ -0.45
TRAF4-202ENST00000262396 TNFRSF10CO14798 259 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 SOCS5O75159 536 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 LRCH4O75427 683 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 SKILP12757 684 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 AMPD1P23109 780 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 ALDH4A1P30038 563 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 VIPR1P32241 457 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 UGT1A5P35504 534 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 GJC1P36383 396 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 GNPDA1P46926 289 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 HCAR3P49019 387 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 ZNF165P49910 485 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 SLC10A7Q0GE19 358 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 PIGHQ14442 188 aaPredicted RBP12.27□□□□□ -0.45
TRAF4-202ENST00000262396 NCAPHQ15003 741 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 AGERQ15109 404 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 HADHQ16836 314 aaKnown RBP12.27□□□□□ -0.45
TRAF4-202ENST00000262396 C14orf28Q4W4Y0 310 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 ARMC12Q5T9G4 340 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 SPECC1LQ69YQ0 1117 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 DOK6Q6PKX4 331 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 ZNF571Q7Z3V5 609 aaPredicted RBP12.27□□□□□ -0.45
TRAF4-202ENST00000262396 B3GNT8Q7Z7M8 397 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.27□□□□□ -0.45
TRAF4-202ENST00000262396 PSKH2Q96QS6 385 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 TMEM168Q9H0V1 697 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 FGF22Q9HCT0 170 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 ATXN7L1Q9ULK2 861 aaPredicted RBP12.27□□□□□ -0.45
TRAF4-202ENST00000262396 PHTF1Q9UMS5 762 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 IGSF10Q6WRI0 2623 aa12.27□□□□□ -0.45
TRAF4-202ENST00000262396 A0A1W2PQC6 194 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 PRSS38A1L453 326 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 NTN3O00634 580 aaPredicted RBP12.26□□□□□ -0.45
TRAF4-202ENST00000262396 MYCLP1P12525 358 aaPredicted RBP12.26□□□□□ -0.45
TRAF4-202ENST00000262396 HGFP14210 728 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 CA4P22748 312 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 SLC5A2P31639 672 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 PCK1P35558 622 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 MMP13P45452 471 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 GPR1P46091 355 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 CDH6P55285 790 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 RALGDSQ12967 914 aa12.26□□□□□ -0.45
TRAF4-202ENST00000262396 MANEAQ5SRI9 462 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms