RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 TOP1MTQ969P6 601 aa18.02■□□□□ 0.47
TRAF4-201ENST00000262395 THAP11Q96EK4 314 aa18.02■□□□□ 0.47
TRAF4-201ENST00000262395 C19orf60Q96EN9 201 aa18.02■□□□□ 0.47
TRAF4-201ENST00000262395 NSUN5Q96P11 429 aaKnown RBP18.02■□□□□ 0.47
TRAF4-201ENST00000262395 UHRF1Q96T88 793 aaPredicted RBP18.02■□□□□ 0.47
TRAF4-201ENST00000262395 SQORQ9Y6N5 450 aa18.02■□□□□ 0.47
TRAF4-201ENST00000262395 EI24O14681 340 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 DARSP14868 501 aaKnown RBP18.01■□□□□ 0.47
TRAF4-201ENST00000262395 PNPLA4P41247 253 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 CLCN2P51788 898 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 SFSWAPQ12872 951 aaKnown RBP18.01■□□□□ 0.47
TRAF4-201ENST00000262395 ARHGAP12Q8IWW6 846 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 ALDH16A1Q8IZ83 802 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 BBS5Q8N3I7 341 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 HM13Q8TCT9 377 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 SENP8Q96LD8 212 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 POLR1BQ9H9Y6 1135 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 PLGRKTQ9HBL7 147 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 USP22Q9UPT9 525 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 ZSWIM8A7E2V4 1837 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 INPP4BO15327 924 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 BMP2P12643 396 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 SMPD1P17405 629 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 FUT4P22083 530 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 GPX3P22352 226 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 SH3BP2P78314 561 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 HECTD2Q5U5R9 776 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 FAM45BPQ6NSW5 357 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 SLC15A3Q8IY34 581 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 FAM45AQ8TCE6 357 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 MRGPRX2Q96LB1 330 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 IPPQ9Y573 584 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 KCTD3Q9Y597 815 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 RAD54BQ9Y620 910 aa18.01■□□□□ 0.47
TRAF4-201ENST00000262395 CLOCKO15516 846 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 ANXA9O76027 345 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 NUP107P57740 925 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 ECT2LQ008S8 904 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 ZBED5Q49AG3 693 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 RABL3Q5HYI8 236 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 LYSMD3Q7Z3D4 306 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 CAMK1DQ8IU85 385 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 LZTR1Q8N653 840 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 NPLQ9BXD5 320 aaPredicted RBP18■□□□□ 0.47
TRAF4-201ENST00000262395 TREX1Q9NSU2 369 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 CCM2LQ9NUG4 571 aaPredicted RBP18■□□□□ 0.47
TRAF4-201ENST00000262395 CMTM6Q9NX76 183 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 CDKN2AIPQ9NXV6 580 aaPredicted RBP18■□□□□ 0.47
TRAF4-201ENST00000262395 TSC2P49815 1807 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 H3BMM5 538 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 B4GAT1O43505 415 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 MAFKO60675 156 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 LINC00032P0C843 101 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 KPNA2P52292 529 aaKnown RBP18■□□□□ 0.47
TRAF4-201ENST00000262395 TUBA4AP68366 448 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 BNIP3Q12983 259 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 CBX3Q13185 183 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 PTPRCAPQ14761 206 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 OGFOD2Q6N063 350 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 PATL1Q86TB9 770 aaKnown RBP18■□□□□ 0.47
TRAF4-201ENST00000262395 RNF168Q8IYW5 571 aaPredicted RBP18■□□□□ 0.47
TRAF4-201ENST00000262395 MAGEE2Q8TD90 523 aaPredicted RBP18■□□□□ 0.47
TRAF4-201ENST00000262395 VPS33AQ96AX1 596 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 BIRC8Q96P09 236 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 DNAJC15Q9Y5T4 150 aa18■□□□□ 0.47
TRAF4-201ENST00000262395 COL1A2P08123 1366 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 PIP5K1BO14986 540 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 MMP3P08254 477 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 PAMP19021 973 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 CYP51A1Q16850 503 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 INTS6LQ5JSJ4 861 aaKnown RBP17.99■□□□□ 0.47
TRAF4-201ENST00000262395 AARS2Q5JTZ9 985 aaKnown RBP17.99■□□□□ 0.47
TRAF4-201ENST00000262395 ERO1BQ86YB8 467 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 SMYD1Q8NB12 490 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 OR6J1Q8NGC5 347 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 SCAMP5Q8TAC9 235 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 LZICQ8WZA0 190 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 HDAC10Q969S8 669 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 PTERQ96BW5 349 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 FAR2Q96K12 515 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 FCRL5Q96RD9 977 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 SEPHS2Q99611 448 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 MID1IP1Q9NPA3 183 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 MARCH4Q9P2E8 410 aaPredicted RBP17.99■□□□□ 0.47
TRAF4-201ENST00000262395 A0A1B0GTL3 188 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 SH3PXD2BA1X283 911 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 PTGESO14684 152 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 ANGPT2O15123 496 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 WNT3AP56704 352 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 RAB39AQ14964 217 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 PSMD5Q16401 504 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 UNC50Q53HI1 259 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 UBXN11Q5T124 520 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 TWF2Q6IBS0 349 aaKnown RBP17.99■□□□□ 0.47
TRAF4-201ENST00000262395 C8orf82Q6P1X6 216 aaPredicted RBP17.99■□□□□ 0.47
TRAF4-201ENST00000262395 BHLHA9Q7RTU4 235 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 TOP6BLQ8N6T0 577 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 PCYOX1LQ8NBM8 494 aa17.99■□□□□ 0.47
TRAF4-201ENST00000262395 FAM155AB1AL88 458 aaPredicted RBP17.99■□□□□ 0.47
TRAF4-201ENST00000262395 H3BMQ9 156 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms