RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 FZD8Q9H461 694 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 MID1IP1Q9NPA3 183 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 PNPLA3Q9NST1 481 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 DOCK2Q92608 1830 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 A0A1B0GUL6 1792 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 MRASO14807 208 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 C4BPAP04003 597 aaKnown RBP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 ARF4P18085 180 aaPredicted RBP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 YY1P25490 414 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 ITGB3BPQ13352 177 aaPredicted RBP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 TMED1Q13445 227 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 C2CD6Q53TS8 623 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 ZC3H12AQ5D1E8 599 aaKnown RBP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 CDKL4Q5MAI5 379 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 ATAT1Q5SQI0 421 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 PIGZQ86VD9 579 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 GPR65Q8IYL9 337 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 B4GALNT2Q8NHY0 566 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 TATDN2Q93075 761 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 RAB7BQ96AH8 199 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 MOAP1Q96BY2 351 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 PPP1R14BQ96C90 147 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 ART5Q96L15 291 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 ANKRD12Q6UB98 2062 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 ADAMDEC1O15204 470 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 UNC5CO95185 931 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 TARSP26639 723 aaKnown RBP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 MBTD1Q05BQ5 628 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 PPIDQ08752 370 aaKnown RBP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 TIGD5Q53EQ6 642 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 XKR4Q5GH76 650 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 MZT2BQ6NZ67 158 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 C8orf59Q8N0T1 100 aaPredicted RBP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 ADCY4Q8NFM4 1077 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 LACRTQ9GZZ8 138 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 HIPK3Q9H422 1215 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 KLK14Q9P0G3 267 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 RIMKLBQ9ULI2 386 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 TRIM17Q9Y577 477 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 ZNF780BQ9Y6R6 833 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 ATMINO43313 823 aaPredicted RBP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 SERPIND1P05546 499 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 NSG1P42857 185 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 CDH8P55286 799 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 PRR5P85299 388 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 AAK1Q2M2I8 961 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 SPANXN2Q5MJ10 180 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 CNKSR3Q6P9H4 555 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 C16orf62Q7Z3J2 963 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 ZNF605Q86T29 641 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 IFNLR1Q8IU57 520 aaPredicted RBP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 GPIHBP1Q8IV16 184 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 MINDY2Q8NBR6 621 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 USP33Q8TEY7 942 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 PLEKHG4BQ96PX9 1271 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 GAS2L1Q99501 681 aaPredicted RBP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 CIPCQ9C0C6 399 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 POLMQ9NP87 494 aaPredicted RBP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 CNTN3Q9P232 1028 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 SEC14L4Q9UDX3 406 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 FBXL21Q9UKT6 434 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 CDC14AQ9UNH5 594 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 WDR27A2RRH5 827 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 NR5A2O00482 541 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 PQBP1O60828 265 aaKnown RBP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 SCELO95171 688 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 PCNAP12004 261 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 PSMC6P62333 389 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 PSPHP78330 225 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 PPARDQ03181 441 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 BIKQ13323 160 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 LRRC14Q15048 493 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 BROXQ5VW32 411 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 IYDQ6PHW0 289 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 RABEPKQ7Z6M1 372 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 CRYBG2Q8N1P7 616 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 C19orf18Q8NEA5 215 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 TCP10LQ8TDR4 215 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 UPF1Q92900 1129 aaKnown RBP eCLIP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 CXorf40BQ96DE9 158 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 FAM84AQ96KN4 292 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 SNRNP25Q9BV90 132 aaKnown RBP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 RAB26Q9ULW5 256 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 STYXL1Q9Y6J8 313 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 FCHO1O14526 889 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 FGBP02675 491 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 NFICP08651 508 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 HNRNPA1P09651 372 aaKnown RBP eCLIP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 ITGB5P18084 799 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 BDNFP23560 247 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 CDH5P33151 784 aaPredicted RBP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 FAUP35544 74 aaKnown RBP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 KCNJ1P48048 391 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 BCAP31P51572 246 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 NR1H2P55055 460 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 CBX2Q14781 532 aaPredicted RBP4.32□□□□□ -1.72
VPS13C-202ENST00000261517 AP5B1Q2VPB7 878 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 ABRAXAS1Q6UWZ7 409 aa4.32□□□□□ -1.72
VPS13C-202ENST00000261517 C14orf80Q86SX3 495 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms