RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 TRAF2Q12933 501 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 LRRC8EQ6NSJ5 796 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 CGB2Q6NT52 195 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 GET4Q7L5D6 327 aaPredicted RBP8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 MYLK4Q86YV6 388 aaPredicted RBP8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 AFAP1L2Q8N4X5 818 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 DCAF4L2Q8NA75 395 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 SHKBP1Q8TBC3 707 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 STYXQ8WUJ0 223 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 HEXDCQ8WVB3 486 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 MGME1Q9BQP7 344 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 TDRD1Q9BXT4 1180 aaKnown RBP8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 ILKAPQ9H0C8 392 aaPredicted RBP8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 RWDD3Q9Y3V2 267 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 LOC100653049A0A140TA62 436 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 SUPT3HB4E1H0 165 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 E9PBE3 544 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 KLHL41O60662 606 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 SMIM24O75264 130 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 SUPT3HO75486 399 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 KRT34O76011 436 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 TRIM16O95361 564 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 PROCP04070 461 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 TYRP14679 529 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 POLR2EP19388 210 aaKnown RBP8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 GABRB3P28472 473 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 CCNFP41002 786 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 CCR2P41597 374 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 MNAT1P51948 309 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 ABCE1P61221 599 aaKnown RBP8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 ZXDBP98169 803 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 ARHGEF7Q14155 803 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 CCDC6Q16204 474 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 INSCQ1MX18 579 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 FBXO48Q5FWF7 155 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 VWA5B1Q5TIE3 1220 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 RNF43Q68DV7 783 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 FAM109BQ6ICB4 259 aaPredicted RBP8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 C6orf89Q6UWU4 347 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 FRA10AC1Q70Z53 315 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 YTHDF3Q7Z739 585 aaKnown RBP8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 CILP2Q8IUL8 1156 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 CYB5D2Q8WUJ1 264 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 PBXIP1Q96AQ6 731 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 MRPL46Q9H2W6 279 aaKnown RBP8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 POMKQ9H5K3 350 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 SLC28A3Q9HAS3 691 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 TRMT6Q9UJA5 497 aaKnown RBP8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 GGA2Q9UJY4 613 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 ANKRD6Q9Y2G4 727 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 TBC1D30Q9Y2I9 924 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 ARIH1Q9Y4X5 557 aaPredicted RBP8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 MICAL3Q7RTP6 2002 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 FCHO1O14526 889 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 GYG2O15488 501 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 PYGLP06737 847 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 ATXN1LP0C7T5 689 aaKnown RBP8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 HNRNPLP14866 589 aaKnown RBP eCLIP8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 PPARGP37231 505 aaPredicted RBP8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 PCLAFQ15004 111 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 TSNAXIP1Q2TAA8 658 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 AFTPHQ6ULP2 937 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 TRIM67Q6ZTA4 783 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 KIAA0408Q6ZU52 694 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 LYSMD3Q7Z3D4 306 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 TTC7BQ86TV6 843 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 TEX26Q8N6G2 289 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 OR13J1Q8NGT2 312 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 SORCS1Q8WY21 1168 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 ACDQ96AP0 544 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 ASB8Q9H765 288 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 TAS2R13Q9NYV9 303 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 DNMT3BQ9UBC3 853 aaKnown RBP8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 SLCO3A1Q9UIG8 710 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 HCFC2Q9Y5Z7 792 aa8.72□□□□□ -1.01
CALCOCO2-201ENST00000258947 GPR39O43194 453 aa8.71□□□□□ -1.01
CALCOCO2-201ENST00000258947 VPS26AO75436 327 aa8.71□□□□□ -1.01
CALCOCO2-201ENST00000258947 GPC4O75487 556 aa8.71□□□□□ -1.01
CALCOCO2-201ENST00000258947 LTA4HP09960 611 aaKnown RBP8.71□□□□□ -1.01
CALCOCO2-201ENST00000258947 CES1P23141 567 aa8.71□□□□□ -1.01
CALCOCO2-201ENST00000258947 AKT1P31749 480 aa8.71□□□□□ -1.01
CALCOCO2-201ENST00000258947 CTSOP43234 321 aaPredicted RBP8.71□□□□□ -1.01
CALCOCO2-201ENST00000258947 TRIM68Q6AZZ1 485 aa8.71□□□□□ -1.01
CALCOCO2-201ENST00000258947 Q6ZVU0 165 aa8.71□□□□□ -1.01
CALCOCO2-201ENST00000258947 C2CD4AQ8NCU7 369 aaPredicted RBP8.71□□□□□ -1.01
CALCOCO2-201ENST00000258947 C10orf82Q8WW14 230 aa8.71□□□□□ -1.01
CALCOCO2-201ENST00000258947 ATP6V1E2Q96A05 226 aa8.71□□□□□ -1.01
CALCOCO2-201ENST00000258947 ZFYVE19Q96K21 471 aa8.71□□□□□ -1.01
CALCOCO2-201ENST00000258947 NUF2Q9BZD4 464 aa8.71□□□□□ -1.01
CALCOCO2-201ENST00000258947 RC3H2Q9HBD1 1191 aaKnown RBP8.71□□□□□ -1.01
CALCOCO2-201ENST00000258947 ZFYVE1Q9HBF4 777 aa8.71□□□□□ -1.01
CALCOCO2-201ENST00000258947 LATS2Q9NRM7 1088 aa8.71□□□□□ -1.01
CALCOCO2-201ENST00000258947 NCKIPSDQ9NZQ3 722 aa8.71□□□□□ -1.01
CALCOCO2-201ENST00000258947 DOCK6Q96HP0 2047 aa8.71□□□□□ -1.02
CALCOCO2-201ENST00000258947 TSC2P49815 1807 aa8.71□□□□□ -1.02
CALCOCO2-201ENST00000258947 ZNF197O14709 1029 aa8.71□□□□□ -1.02
CALCOCO2-201ENST00000258947 TRIM24O15164 1050 aa8.71□□□□□ -1.02
CALCOCO2-201ENST00000258947 LDB2O43679 373 aa8.71□□□□□ -1.02
CALCOCO2-201ENST00000258947 SNX2O60749 519 aa8.71□□□□□ -1.02
CALCOCO2-201ENST00000258947 PRAMEF12O95522 483 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms