RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 TOP3AQ13472 1001 aaPredicted RBP11.88□□□□□ -0.51
CCNA1-201ENST00000255465 DNASE1L3Q13609 305 aa11.88□□□□□ -0.51
CCNA1-201ENST00000255465 DDR2Q16832 855 aa11.88□□□□□ -0.51
CCNA1-201ENST00000255465 XKR3Q5GH77 459 aa11.88□□□□□ -0.51
CCNA1-201ENST00000255465 ATAD3CQ5T2N8 411 aa11.88□□□□□ -0.51
CCNA1-201ENST00000255465 FAM47BQ8NA70 645 aa11.88□□□□□ -0.51
CCNA1-201ENST00000255465 LNX1Q8TBB1 728 aaPredicted RBP11.88□□□□□ -0.51
CCNA1-201ENST00000255465 CALML4Q96GE6 196 aa11.88□□□□□ -0.51
CCNA1-201ENST00000255465 RBM14Q96PK6 669 aaKnown RBP11.88□□□□□ -0.51
CCNA1-201ENST00000255465 HSD17B14Q9BPX1 270 aa11.88□□□□□ -0.51
CCNA1-201ENST00000255465 LXNQ9BS40 222 aa11.88□□□□□ -0.51
CCNA1-201ENST00000255465 SAYSD1Q9NPB0 183 aa11.88□□□□□ -0.51
CCNA1-201ENST00000255465 TOR4AQ9NXH8 423 aa11.88□□□□□ -0.51
CCNA1-201ENST00000255465 MTRRQ9UBK8 725 aa11.88□□□□□ -0.51
CCNA1-201ENST00000255465 WDPCPO95876 746 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 MBL2P11226 248 aaPredicted RBP11.87□□□□□ -0.51
CCNA1-201ENST00000255465 HOXB3P14651 431 aaPredicted RBP11.87□□□□□ -0.51
CCNA1-201ENST00000255465 SELPP16109 830 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 ITGA2P17301 1181 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 PSMA3P25788 255 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 ABCG1P45844 678 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 KCNJ1P48048 391 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 GPLD1P80108 840 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 KCNH2Q12809 1159 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 PDIA2Q13087 525 aaKnown RBP11.87□□□□□ -0.51
CCNA1-201ENST00000255465 PPIGQ13427 754 aaKnown RBP eCLIP11.87□□□□□ -0.51
CCNA1-201ENST00000255465 RFTN1Q14699 578 aaPredicted RBP11.87□□□□□ -0.51
CCNA1-201ENST00000255465 DGUOKQ16854 277 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 FAM26DQ5JW98 314 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 TAF2Q6P1X5 1199 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 DCUN1D2Q6PH85 259 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 ZNF773Q6PK81 442 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 ABRAXAS1Q6UWZ7 409 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 KCTD8Q6ZWB6 473 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 LRRC8DQ7L1W4 858 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 PLCZ1Q86YW0 608 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 RNF135Q8IUD6 432 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 C4orf19Q8IY42 314 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 ZNF786Q8N393 782 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 CCDC185Q8N715 623 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 MCOLN3Q8TDD5 553 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 BLOC1S5Q8TDH9 187 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 SLC44A1Q8WWI5 657 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 KLHL6Q8WZ60 621 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 NCLNQ969V3 563 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 E2F7Q96AV8 911 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 HDAC11Q96DB2 347 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 B3GALT6Q96L58 329 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 NIFKQ9BYG3 293 aaKnown RBP11.87□□□□□ -0.51
CCNA1-201ENST00000255465 COQ10BQ9H8M1 238 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 EFCAB1Q9HAE3 211 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 ZNF556Q9HAH1 456 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 PLEKHA5Q9HAU0 1116 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 SLC17A7Q9P2U7 560 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 ZC3H7BQ9UGR2 993 aaKnown RBP11.87□□□□□ -0.51
CCNA1-201ENST00000255465 SEPT9Q9UHD8 586 aaPredicted RBP11.87□□□□□ -0.51
CCNA1-201ENST00000255465 BAG5Q9UL15 447 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 PCDHA2Q9Y5H9 948 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 AUP1Q9Y679 476 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 A0A0B4J269 797 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 TMEM150BA6NC51 233 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 PRSS44E7EML9 344 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 TMX2-CTNND1H3BSU7 103 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 MUSKO15146 869 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 PHGDHO43175 533 aaKnown RBP11.87□□□□□ -0.51
CCNA1-201ENST00000255465 ARHGEF9O43307 516 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 CSPG5O95196 566 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 TRIM16O95361 564 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 STMN1P16949 149 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 PSMA4P25789 261 aaKnown RBP11.87□□□□□ -0.51
CCNA1-201ENST00000255465 EPHA3P29320 983 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 AXLP30530 894 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 SOX5P35711 763 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 HTR2BP41595 481 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 MRPS22P82650 360 aaKnown RBP11.87□□□□□ -0.51
CCNA1-201ENST00000255465 NME3Q13232 169 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 TUBB3Q13509 450 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 PPP2R5DQ14738 602 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 MORF4L2Q15014 288 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 TARBP2Q15633 366 aaKnown RBP11.87□□□□□ -0.51
CCNA1-201ENST00000255465 TEX44Q53QW1 395 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 INTS11Q5TA45 600 aaKnown RBP11.87□□□□□ -0.51
CCNA1-201ENST00000255465 CACHD1Q5VU97 1274 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 GARNL3Q5VVW2 1013 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 TRAF7Q6Q0C0 670 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 C16orf59Q7L2K0 433 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 ARID3BQ8IVW6 561 aaPredicted RBP11.87□□□□□ -0.51
CCNA1-201ENST00000255465 HIPK4Q8NE63 616 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 CMASQ8NFW8 434 aaPredicted RBP11.87□□□□□ -0.51
CCNA1-201ENST00000255465 OR6Q1Q8NGQ2 317 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 DNAJB3Q8WWF6 145 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 STON2Q8WXE9 905 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 VWCEQ96DN2 955 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 WACQ9BTA9 647 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 ACSS3Q9H6R3 686 aa11.87□□□□□ -0.51
CCNA1-201ENST00000255465 TRIOBPQ9H2D6 2365 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 SMIM35A0A1B0GVV1 85 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 KPNA5O15131 536 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 ABCB7O75027 752 aa11.86□□□□□ -0.51
CCNA1-201ENST00000255465 C22orf31O95567 290 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms