RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 POLNQ7Z5Q5 900 aa21.13■□□□□ 0.97
NEDD8-201ENST00000250495 TAF8Q7Z7C8 310 aa21.13■□□□□ 0.97
NEDD8-201ENST00000250495 SPOCK2Q92563 424 aa21.13■□□□□ 0.97
NEDD8-201ENST00000250495 CCDC74AQ96AQ1 378 aa21.13■□□□□ 0.97
NEDD8-201ENST00000250495 GFM1Q96RP9 751 aaKnown RBP21.13■□□□□ 0.97
NEDD8-201ENST00000250495 BZW2Q9Y6E2 419 aaKnown RBP21.13■□□□□ 0.97
NEDD8-201ENST00000250495 BPTFQ12830 3046 aa21.13■□□□□ 0.97
NEDD8-201ENST00000250495 LRP4O75096 1905 aa21.12■□□□□ 0.97
NEDD8-201ENST00000250495 A8MX80 341 aa21.12■□□□□ 0.97
NEDD8-201ENST00000250495 CDRT15L2A8MXV6 281 aa21.12■□□□□ 0.97
NEDD8-201ENST00000250495 SOCS5O75159 536 aa21.12■□□□□ 0.97
NEDD8-201ENST00000250495 TNFSF15O95150 251 aa21.12■□□□□ 0.97
NEDD8-201ENST00000250495 IL1R2P27930 398 aa21.12■□□□□ 0.97
NEDD8-201ENST00000250495 EIF3IQ13347 325 aaKnown RBP21.12■□□□□ 0.97
NEDD8-201ENST00000250495 PNCKQ6P2M8 343 aa21.12■□□□□ 0.97
NEDD8-201ENST00000250495 OGFOD3Q6PK18 319 aa21.12■□□□□ 0.97
NEDD8-201ENST00000250495 NYAP1Q6ZVC0 841 aa21.12■□□□□ 0.97
NEDD8-201ENST00000250495 TP53INP2Q8IXH6 220 aa21.12■□□□□ 0.97
NEDD8-201ENST00000250495 FAM46DQ8NEK8 389 aa21.12■□□□□ 0.97
NEDD8-201ENST00000250495 GPR156Q8NFN8 814 aa21.12■□□□□ 0.97
NEDD8-201ENST00000250495 NSMCE1Q8WV22 266 aa21.12■□□□□ 0.97
NEDD8-201ENST00000250495 OR1E3Q8WZA6 343 aa21.12■□□□□ 0.97
NEDD8-201ENST00000250495 HSPH1Q92598 858 aa21.12■□□□□ 0.97
NEDD8-201ENST00000250495 PDXPQ96GD0 296 aa21.12■□□□□ 0.97
NEDD8-201ENST00000250495 LIN37Q96GY3 246 aaPredicted RBP21.12■□□□□ 0.97
NEDD8-201ENST00000250495 NUDCD1Q96RS6 583 aa21.12■□□□□ 0.97
NEDD8-201ENST00000250495 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.12■□□□□ 0.97
NEDD8-201ENST00000250495 STRADBQ9C0K7 418 aa21.12■□□□□ 0.97
NEDD8-201ENST00000250495 PCDHGC4Q9Y5F7 938 aa21.12■□□□□ 0.97
NEDD8-201ENST00000250495 UNC13CQ8NB66 2214 aa21.12■□□□□ 0.97
NEDD8-201ENST00000250495 CASC3O15234 703 aaKnown RBP21.11■□□□□ 0.97
NEDD8-201ENST00000250495 HTRA2O43464 458 aaPredicted RBP21.11■□□□□ 0.97
NEDD8-201ENST00000250495 PRB1P04280 392 aa21.11■□□□□ 0.97
NEDD8-201ENST00000250495 PDX1P52945 283 aa21.11■□□□□ 0.97
NEDD8-201ENST00000250495 CCL7P80098 99 aa21.11■□□□□ 0.97
NEDD8-201ENST00000250495 SKOR1P84550 965 aa21.11■□□□□ 0.97
NEDD8-201ENST00000250495 RHDQ02161 417 aa21.11■□□□□ 0.97
NEDD8-201ENST00000250495 TSR1Q2NL82 804 aaKnown RBP21.11■□□□□ 0.97
NEDD8-201ENST00000250495 SMTNL2Q2TAL5 461 aa21.11■□□□□ 0.97
NEDD8-201ENST00000250495 RALGPS1Q5JS13 557 aa21.11■□□□□ 0.97
NEDD8-201ENST00000250495 CAVIN1Q6NZI2 390 aaKnown RBP21.11■□□□□ 0.97
NEDD8-201ENST00000250495 PDCD6IPQ8WUM4 868 aaKnown RBP21.11■□□□□ 0.97
NEDD8-201ENST00000250495 NSMCE3Q96MG7 304 aa21.11■□□□□ 0.97
NEDD8-201ENST00000250495 LRRN3Q9H3W5 708 aa21.11■□□□□ 0.97
NEDD8-201ENST00000250495 WDR26Q9H7D7 661 aa21.11■□□□□ 0.97
NEDD8-201ENST00000250495 CPNE5Q9HCH3 593 aa21.11■□□□□ 0.97
NEDD8-201ENST00000250495 FGF22Q9HCT0 170 aa21.11■□□□□ 0.97
NEDD8-201ENST00000250495 MRPL40Q9NQ50 206 aaKnown RBP21.11■□□□□ 0.97
NEDD8-201ENST00000250495 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.11■□□□□ 0.97
NEDD8-201ENST00000250495 ETNK2Q9NVF9 386 aa21.11■□□□□ 0.97
NEDD8-201ENST00000250495 B4GALT6Q9UBX8 382 aa21.11■□□□□ 0.97
NEDD8-201ENST00000250495 RABGEF1Q9UJ41 708 aa21.11■□□□□ 0.97
NEDD8-201ENST00000250495 PHTF1Q9UMS5 762 aa21.11■□□□□ 0.97
NEDD8-201ENST00000250495 TTC24A2A3L6 582 aaPredicted RBP21.1■□□□□ 0.97
NEDD8-201ENST00000250495 ERVH48-1M5A8F1 160 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 RPLP0P05388 317 aaKnown RBP21.1■□□□□ 0.97
NEDD8-201ENST00000250495 ITGA2BP08514 1039 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 RARAP10276 462 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 CYP2A6P11509 494 aaPredicted RBP21.1■□□□□ 0.97
NEDD8-201ENST00000250495 PNLIPP16233 465 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 GLB1P16278 677 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 GM2AP17900 193 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 CR2P20023 1033 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 SERPINB6P35237 376 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 IQCB1Q15051 598 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 TDRD12Q587J7 1177 aaKnown RBP21.1■□□□□ 0.97
NEDD8-201ENST00000250495 ARHGAP40Q5TG30 622 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 KCTD16Q68DU8 428 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 CLEC14AQ86T13 490 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 FBXO39Q8N4B4 442 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 TEKT4Q8WW24 435 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 SYN2Q92777 582 aaPredicted RBP21.1■□□□□ 0.97
NEDD8-201ENST00000250495 COQ10AQ96MF6 247 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 TMEM74Q96NL1 305 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 CSPG4P5Q96PW8 444 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 LGR4Q9BXB1 951 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 CYP4F12Q9HCS2 524 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 MOSPD1Q9UJG1 213 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 APPL1Q9UKG1 709 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 SSUH2Q9Y2M2 353 aa21.1■□□□□ 0.97
NEDD8-201ENST00000250495 A0A1W2PQM1 296 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 D6RAR5 112 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 PLD2O14939 933 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 MAFKO60675 156 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 PEX11BO96011 259 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 CPP00450 1065 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 VIPR1P32241 457 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 INHBCP55103 352 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 CDH6P55285 790 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 TPM4P67936 248 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 VAC14Q08AM6 782 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 TAF1BQ53T94 588 aaPredicted RBP21.09■□□□□ 0.97
NEDD8-201ENST00000250495 MARC1Q5VT66 337 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 RAB11FIP2Q7L804 512 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 ATPAF2Q8N5M1 289 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 NUS1Q96E22 293 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 WBP1Q96G27 269 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 MGME1Q9BQP7 344 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 TMEM168Q9H0V1 697 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 DPEP2Q9H4A9 486 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms