RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 DCP1BQ8IZD4 617 aaKnown RBP16.46■□□□□ 0.23
HOXD3-201ENST00000249440 AHI1Q8N157 1196 aa16.46■□□□□ 0.23
HOXD3-201ENST00000249440 NAT14Q8WUY8 206 aa16.46■□□□□ 0.23
HOXD3-201ENST00000249440 ATP6V1E2Q96A05 226 aa16.46■□□□□ 0.23
HOXD3-201ENST00000249440 EME1Q96AY2 570 aa16.46■□□□□ 0.23
HOXD3-201ENST00000249440 LZTS1Q9Y250 596 aa16.46■□□□□ 0.23
HOXD3-201ENST00000249440 NRP2O60462 931 aa16.46■□□□□ 0.23
HOXD3-201ENST00000249440 CNTN5O94779 1100 aa16.46■□□□□ 0.23
HOXD3-201ENST00000249440 WISP3O95389 354 aaPredicted RBP16.46■□□□□ 0.23
HOXD3-201ENST00000249440 C8BP07358 591 aa16.46■□□□□ 0.23
HOXD3-201ENST00000249440 SMIM18P0DKX4 95 aa16.46■□□□□ 0.23
HOXD3-201ENST00000249440 ACADVLP49748 655 aa16.46■□□□□ 0.23
HOXD3-201ENST00000249440 TNK2Q07912 1038 aa16.46■□□□□ 0.23
HOXD3-201ENST00000249440 LPIN1Q14693 890 aa16.46■□□□□ 0.23
HOXD3-201ENST00000249440 ALFQ53S48 1182 aa16.46■□□□□ 0.23
HOXD3-201ENST00000249440 TMEM207Q6UWW9 146 aa16.46■□□□□ 0.23
HOXD3-201ENST00000249440 LARP4Q71RC2 724 aaKnown RBP eCLIP16.46■□□□□ 0.23
HOXD3-201ENST00000249440 LDB1Q86U70 411 aaPredicted RBP16.46■□□□□ 0.23
HOXD3-201ENST00000249440 GALNT4Q8N4A0 578 aa16.46■□□□□ 0.23
HOXD3-201ENST00000249440 PNPLA1Q8N8W4 532 aa16.46■□□□□ 0.23
HOXD3-201ENST00000249440 ATP6V0D2Q8N8Y2 350 aa16.46■□□□□ 0.23
HOXD3-201ENST00000249440 PCDHAC1Q9H158 963 aa16.46■□□□□ 0.23
HOXD3-201ENST00000249440 RGS18Q9NS28 235 aa16.46■□□□□ 0.23
HOXD3-201ENST00000249440 PLK2Q9NYY3 685 aa16.46■□□□□ 0.23
HOXD3-201ENST00000249440 LOC285095A0A1B0GVY8 99 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 UBFD1O14562 309 aaKnown RBP16.45■□□□□ 0.22
HOXD3-201ENST00000249440 VEGFBP49765 207 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 ATP4BP51164 291 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 ARSDP51689 593 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 STX1BP61266 288 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 HERVK_113P63132 956 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 NFKB2Q00653 900 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 AP1ARQ63HQ0 302 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 SPNS2Q8IVW8 549 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 FUBP3Q96I24 572 aaKnown RBP eCLIP16.45■□□□□ 0.22
HOXD3-201ENST00000249440 ASB2Q96Q27 587 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 ERVK-6Q9BXR3 956 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 ZCWPW1Q9H0M4 648 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 CRYL1Q9Y2S2 319 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 IGLV3-10A0A075B6K4 115 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 CCL22O00626 93 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 MRASO14807 208 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 LDB2O43679 373 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 TRPA1O75762 1119 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 GLP2RO95838 553 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 ARSAP15289 507 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 HOXB8P17481 243 aaPredicted RBP16.45■□□□□ 0.22
HOXD3-201ENST00000249440 TM4SF4P48230 202 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 KCNC1P48547 511 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 CACNB2Q08289 660 aaPredicted RBP16.45■□□□□ 0.22
HOXD3-201ENST00000249440 LAMB3Q13751 1172 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 IHHQ14623 411 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 NFE2Q16621 373 aaPredicted RBP16.45■□□□□ 0.22
HOXD3-201ENST00000249440 DDR2Q16832 855 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 SDHAF4Q5VUM1 108 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 CLEC6AQ6EIG7 209 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 HACD2Q6Y1H2 254 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 EP400NLQ6ZTU2 488 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 CLYBLQ8N0X4 340 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 ARRDC2Q8TBH0 407 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 PEX13Q92968 403 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 TADA1Q96BN2 335 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 DGCR14Q96DF8 476 aaKnown RBP16.45■□□□□ 0.22
HOXD3-201ENST00000249440 C19orf60Q96EN9 201 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 ZFRQ96KR1 1074 aaKnown RBP16.45■□□□□ 0.22
HOXD3-201ENST00000249440 BTN2A3PQ96KV6 586 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 C8orf48Q96LL4 319 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 CREBZFQ9NS37 354 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 MARCH4Q9P2E8 410 aaPredicted RBP16.45■□□□□ 0.22
HOXD3-201ENST00000249440 CROTQ9UKG9 612 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 PLXNA3P51805 1871 aa16.45■□□□□ 0.22
HOXD3-201ENST00000249440 TTC24A2A3L6 582 aaPredicted RBP16.44■□□□□ 0.22
HOXD3-201ENST00000249440 PRORSD1PA6NEY8 169 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 H0YJX3 145 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 FAM58BPP0C7Q3 252 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 ATXN1LP0C7T5 689 aaKnown RBP16.44■□□□□ 0.22
HOXD3-201ENST00000249440 HDCP19113 662 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 YWHAQP27348 245 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 IL10RBQ08334 325 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 EFEMP1Q12805 493 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 SAMD4BQ5PRF9 694 aaKnown RBP16.44■□□□□ 0.22
HOXD3-201ENST00000249440 C6orf52Q5T4I8 152 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 LPGAT1Q92604 370 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 PRICKLE1Q96MT3 831 aaPredicted RBP16.44■□□□□ 0.22
HOXD3-201ENST00000249440 MRPS26Q9BYN8 205 aaKnown RBP16.44■□□□□ 0.22
HOXD3-201ENST00000249440 ZNF696Q9H7X3 374 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 TMEM181Q9P2C4 612 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 CD300AQ9UGN4 299 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 ATP6AP2A0A1C7CYW4 349 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 OR51F1A6NGY5 319 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 ATP6AP2O75787 350 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 SRP72O76094 671 aaKnown RBP16.44■□□□□ 0.22
HOXD3-201ENST00000249440 OAZ2O95190 189 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 STAMBPO95630 424 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 TFAP2AP05549 437 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 CD1DP15813 335 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 ZNF26P17031 533 aaPredicted RBP16.44■□□□□ 0.22
HOXD3-201ENST00000249440 PBX3P40426 434 aa16.44■□□□□ 0.22
HOXD3-201ENST00000249440 POLD3Q15054 466 aaPredicted RBP16.44■□□□□ 0.22
HOXD3-201ENST00000249440 MGAT5BQ3V5L5 792 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms