RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 SSX2IPQ9Y2D8 614 aa15.17■□□□□ 0.02
DDX49-201ENST00000247003 CCDC162PA2VCL2 907 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 A8MT66 165 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 H3BNC9 293 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 PFDN6O15212 129 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 BUD23O43709 281 aaKnown RBP15.16■□□□□ 0.02
DDX49-201ENST00000247003 TSPAN3O60637 253 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 LATS1O95835 1130 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 PIRTP0C851 137 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 MBL2P11226 248 aaPredicted RBP15.16■□□□□ 0.02
DDX49-201ENST00000247003 CCL5P13501 91 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 ADSLP30566 484 aaPredicted RBP15.16■□□□□ 0.02
DDX49-201ENST00000247003 VHLP40337 213 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 EPHB3P54753 998 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 AP2B1P63010 937 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 SLC34A1Q06495 639 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 PDAP1Q13442 181 aaKnown RBP15.16■□□□□ 0.02
DDX49-201ENST00000247003 MUM1Q2TAK8 710 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 TRIM60Q495X7 471 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 RNF219Q5W0B1 726 aaPredicted RBP15.16■□□□□ 0.02
DDX49-201ENST00000247003 ZNF783Q6ZMS7 281 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 LSMEM2Q8N112 164 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 PHTF2Q8N3S3 785 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 PPFIBP2Q8ND30 876 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 OR13C4Q8NGS5 318 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 EXOC2Q96KP1 924 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 TOX2Q96NM4 488 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 TRIB3Q96RU7 358 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 RTKNQ9BST9 563 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 ADGRE3Q9BY15 652 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 SUDS3Q9H7L9 328 aaPredicted RBP15.16■□□□□ 0.02
DDX49-201ENST00000247003 CYP4F12Q9HCS2 524 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 GKN1Q9NS71 199 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 NLE1Q9NVX2 485 aaPredicted RBP15.16■□□□□ 0.02
DDX49-201ENST00000247003 SLC7A8Q9UHI5 535 aa15.16■□□□□ 0.02
DDX49-201ENST00000247003 LOC100653049A0A140TA62 436 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 H0Y626 953 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 GRID2O43424 1007 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 ZBTB14O43829 449 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 KRT34O76011 436 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 LUC7L3O95232 432 aaKnown RBP15.15■□□□□ 0.02
DDX49-201ENST00000247003 FDXRP22570 491 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 STC1P52823 247 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 CDKN2DP55273 166 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 ACTR3P61158 418 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 SATB1Q01826 763 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 TLE2Q04725 743 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 TWF1Q12792 350 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 TAF1AQ15573 450 aaPredicted RBP15.15■□□□□ 0.02
DDX49-201ENST00000247003 GPR158Q5T848 1215 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 C16orf59Q7L2K0 433 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 OR52K2Q8NGK3 314 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 ACTRT2Q8TDY3 377 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 MOCOSQ96EN8 888 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 CLPTM1LQ96KA5 538 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 KLF16Q9BXK1 252 aaPredicted RBP15.15■□□□□ 0.02
DDX49-201ENST00000247003 TDRD1Q9BXT4 1180 aaKnown RBP15.15■□□□□ 0.02
DDX49-201ENST00000247003 ALG9Q9H6U8 611 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 STX18Q9P2W9 335 aaKnown RBP15.15■□□□□ 0.02
DDX49-201ENST00000247003 VPS9D1Q9Y2B5 631 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 TBC1D30Q9Y2I9 924 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 ACTL7AQ9Y615 435 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 UBA6A0AVT1 1052 aaPredicted RBP15.15■□□□□ 0.02
DDX49-201ENST00000247003 C2orf78A6NCI8 922 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 C1RP00736 705 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 KLKB1P03952 638 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 LAG3P18627 525 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 PIK3R1P27986 724 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 RFC2P35250 354 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 SGSHP51688 502 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 C16orf89Q6UX73 402 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 FRMD7Q6ZUT3 714 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 RAB44Q7Z6P3 723 aaPredicted RBP15.15■□□□□ 0.02
DDX49-201ENST00000247003 ITIH5Q86UX2 942 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 SLC39A11Q8N1S5 342 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 LPCAT1Q8NF37 534 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 PANX3Q96QZ0 392 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 TRMOQ9BU70 441 aa15.15■□□□□ 0.02
DDX49-201ENST00000247003 A0A088AWK7 358 aa15.14■□□□□ 0.01
DDX49-201ENST00000247003 NEMP2A6NFY4 417 aa15.14■□□□□ 0.01
DDX49-201ENST00000247003 FKBP6O75344 327 aa15.14■□□□□ 0.01
DDX49-201ENST00000247003 PENKP01210 267 aaPredicted RBP15.14■□□□□ 0.01
DDX49-201ENST00000247003 ZNF140P52738 457 aaPredicted RBP15.14■□□□□ 0.01
DDX49-201ENST00000247003 GALNT1Q10472 559 aaPredicted RBP15.14■□□□□ 0.01
DDX49-201ENST00000247003 RAB33AQ14088 237 aa15.14■□□□□ 0.01
DDX49-201ENST00000247003 TYSND1Q2T9J0 566 aa15.14■□□□□ 0.01
DDX49-201ENST00000247003 PIM3Q86V86 326 aa15.14■□□□□ 0.01
DDX49-201ENST00000247003 DEFB107AQ8IZN7 70 aa15.14■□□□□ 0.01
DDX49-201ENST00000247003 CARNMT1Q8N4J0 409 aa15.14■□□□□ 0.01
DDX49-201ENST00000247003 HJURPQ8NCD3 748 aaPredicted RBP15.14■□□□□ 0.01
DDX49-201ENST00000247003 CEP70Q8NHQ1 597 aa15.14■□□□□ 0.01
DDX49-201ENST00000247003 RP9Q8TA86 221 aaKnown RBP15.14■□□□□ 0.01
DDX49-201ENST00000247003 DTX3LQ8TDB6 740 aa15.14■□□□□ 0.01
DDX49-201ENST00000247003 ANKRD49Q8WVL7 239 aa15.14■□□□□ 0.01
DDX49-201ENST00000247003 JADE3Q92613 823 aa15.14■□□□□ 0.01
DDX49-201ENST00000247003 N4BP2L2Q92802 583 aaPredicted RBP15.14■□□□□ 0.01
DDX49-201ENST00000247003 PHF21BQ96EK2 531 aa15.14■□□□□ 0.01
DDX49-201ENST00000247003 CDKN2AIPNLQ96HQ2 116 aa15.14■□□□□ 0.01
DDX49-201ENST00000247003 RNF38Q9H0F5 515 aa15.14■□□□□ 0.01
DDX49-201ENST00000247003 SYTL2Q9HCH5 934 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms