RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 VPS51Q9UID3 782 aa18.53■□□□□ 0.56
HOXC11-201ENST00000243082 SORCS3Q9UPU3 1222 aa18.53■□□□□ 0.56
HOXC11-201ENST00000243082 PRR5-ARHGAP8B1AHC4 643 aa18.52■□□□□ 0.56
HOXC11-201ENST00000243082 CKMP06732 381 aa18.52■□□□□ 0.56
HOXC11-201ENST00000243082 ENO1P06733 434 aaKnown RBP18.52■□□□□ 0.56
HOXC11-201ENST00000243082 C8AP07357 584 aa18.52■□□□□ 0.56
HOXC11-201ENST00000243082 MPSTP25325 297 aa18.52■□□□□ 0.56
HOXC11-201ENST00000243082 ARHGAP8P85298 464 aa18.52■□□□□ 0.56
HOXC11-201ENST00000243082 TIAL1Q01085 375 aaKnown RBP eCLIP18.52■□□□□ 0.56
HOXC11-201ENST00000243082 AGAP9Q5VTM2 703 aa18.52■□□□□ 0.56
HOXC11-201ENST00000243082 FAM45BPQ6NSW5 357 aa18.52■□□□□ 0.56
HOXC11-201ENST00000243082 TMC7Q7Z402 723 aa18.52■□□□□ 0.56
HOXC11-201ENST00000243082 GLT6D1Q7Z4J2 308 aa18.52■□□□□ 0.56
HOXC11-201ENST00000243082 LSMEM2Q8N112 164 aa18.52■□□□□ 0.56
HOXC11-201ENST00000243082 TXNDC5Q8NBS9 432 aaKnown RBP18.52■□□□□ 0.56
HOXC11-201ENST00000243082 FAM13CQ8NE31 585 aa18.52■□□□□ 0.56
HOXC11-201ENST00000243082 TTC16Q8NEE8 873 aa18.52■□□□□ 0.56
HOXC11-201ENST00000243082 OR4K2Q8NGD2 314 aa18.52■□□□□ 0.56
HOXC11-201ENST00000243082 FAM45AQ8TCE6 357 aa18.52■□□□□ 0.56
HOXC11-201ENST00000243082 MAPK15Q8TD08 544 aa18.52■□□□□ 0.56
HOXC11-201ENST00000243082 SGF29Q96ES7 293 aa18.52■□□□□ 0.56
HOXC11-201ENST00000243082 ZBED2Q9BTP6 218 aa18.52■□□□□ 0.56
HOXC11-201ENST00000243082 RAP2CQ9Y3L5 183 aa18.52■□□□□ 0.56
HOXC11-201ENST00000243082 MTF2Q9Y483 593 aaPredicted RBP18.52■□□□□ 0.56
HOXC11-201ENST00000243082 ANKRD66B4E2M5 251 aa18.52■□□□□ 0.55
HOXC11-201ENST00000243082 PRSS56P0CW18 603 aa18.52■□□□□ 0.55
HOXC11-201ENST00000243082 GJA1P17302 382 aa18.52■□□□□ 0.55
HOXC11-201ENST00000243082 OGNP20774 298 aaKnown RBP18.52■□□□□ 0.55
HOXC11-201ENST00000243082 SLC8A1P32418 973 aa18.52■□□□□ 0.55
HOXC11-201ENST00000243082 CDH18Q13634 790 aa18.52■□□□□ 0.55
HOXC11-201ENST00000243082 TBCCQ15814 346 aa18.52■□□□□ 0.55
HOXC11-201ENST00000243082 TYSND1Q2T9J0 566 aa18.52■□□□□ 0.55
HOXC11-201ENST00000243082 CCDC149Q6ZUS6 474 aa18.52■□□□□ 0.55
HOXC11-201ENST00000243082 SUGP1Q8IWZ8 645 aaKnown RBP18.52■□□□□ 0.55
HOXC11-201ENST00000243082 KREMEN2Q8NCW0 462 aa18.52■□□□□ 0.55
HOXC11-201ENST00000243082 SCG3Q8WXD2 468 aaKnown RBP18.52■□□□□ 0.55
HOXC11-201ENST00000243082 CFAP97Q9P2B7 532 aa18.52■□□□□ 0.55
HOXC11-201ENST00000243082 LSM7Q9UK45 103 aaKnown RBP18.52■□□□□ 0.55
HOXC11-201ENST00000243082 FCF1Q9Y324 198 aaKnown RBP18.52■□□□□ 0.55
HOXC11-201ENST00000243082 DENND4CQ5VZ89 1909 aa18.52■□□□□ 0.55
HOXC11-201ENST00000243082 A0A1W2PRU2 124 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 GSC2O15499 205 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 DIAPH2O60879 1101 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 PIGNO95427 931 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 MT-CO1P00395 513 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 MYL4P12829 197 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 AOC1P19801 751 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 FDXRP22570 491 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 ATP5F1P24539 256 aaPredicted RBP18.51■□□□□ 0.55
HOXC11-201ENST00000243082 STC1P52823 247 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 DNAJB13P59910 316 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 PFKPQ01813 784 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 ILF2Q12905 390 aaKnown RBP18.51■□□□□ 0.55
HOXC11-201ENST00000243082 ACAP2Q15057 778 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 SLC9B1Q4ZJI4 515 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 PIM3Q86V86 326 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 MFN1Q8IWA4 741 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 BBS7Q8IWZ6 715 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 APCDD1Q8J025 514 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 DCAF4L2Q8NA75 395 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 AGR3Q8TD06 166 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 ADGRE3Q9BY15 652 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 TAGLN3Q9UI15 199 aa18.51■□□□□ 0.55
HOXC11-201ENST00000243082 CORO1CQ9ULV4 474 aaPredicted RBP18.51■□□□□ 0.55
HOXC11-201ENST00000243082 NEMP2A6NFY4 417 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 C2orf81A6NN90 581 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 MATN2O00339 956 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 GYG2O15488 501 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 FGBP02675 491 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 ADH1AP07327 375 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 SLC26A3P40879 764 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 CPA2P48052 419 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 RPL14P50914 215 aaKnown RBP18.5■□□□□ 0.55
HOXC11-201ENST00000243082 RHOAP61586 193 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 GPR158Q5T848 1215 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 SDCCAG8Q86SQ7 713 aaPredicted RBP18.5■□□□□ 0.55
HOXC11-201ENST00000243082 CPXM2Q8N436 756 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 MAGEC3Q8TD91 643 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 DDI1Q8WTU0 396 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 CD248Q9HCU0 757 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 CXXC1Q9P0U4 656 aaPredicted RBP18.5■□□□□ 0.55
HOXC11-201ENST00000243082 ZDHHC2Q9UIJ5 367 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 INSL6Q9Y581 213 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 K7ERQ8 282 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 RBP1P09455 135 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 KCNA5P22460 613 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 ABL2P42684 1182 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 ERVFC1P60507 584 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 ASPHQ12797 758 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 PRKAA1Q13131 559 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 PTPRRQ15256 657 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 CFAP157Q5JU67 520 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 ATXN7L2Q5T6C5 722 aaPredicted RBP18.5■□□□□ 0.55
HOXC11-201ENST00000243082 TEX9Q8N6V9 391 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 PDCD6IPQ8WUM4 868 aaKnown RBP18.5■□□□□ 0.55
HOXC11-201ENST00000243082 SLC46A2Q9BY10 475 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 POMKQ9H5K3 350 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 CLEC4EQ9ULY5 219 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 ZNF510Q9Y2H8 683 aa18.5■□□□□ 0.55
HOXC11-201ENST00000243082 SH3BP1Q9Y3L3 701 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms