RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 PID1Q7Z2X4 250 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 SLC13A5Q86YT5 568 aaPredicted RBP11.34□□□□□ -0.59
SF3B6-201ENST00000233468 MFSD2AQ8NA29 543 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 DENND6BQ8NEG7 585 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 GATA6Q92908 595 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 IFT43Q96FT9 208 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 LENG8Q96PV6 779 aaPredicted RBP11.34□□□□□ -0.59
SF3B6-201ENST00000233468 NAP1L3Q99457 506 aaPredicted RBP11.34□□□□□ -0.59
SF3B6-201ENST00000233468 GLOD4Q9HC38 313 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 CAPN10Q9HC96 672 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 TM9SF3Q9HD45 589 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 PCDH12Q9NPG4 1184 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 HOMER3Q9NSC5 361 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 TRMT1Q9NXH9 659 aaKnown RBP11.34□□□□□ -0.59
SF3B6-201ENST00000233468 GOLGA6AQ9NYA3 693 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 ZKSCAN5Q9Y2L8 839 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 HS3ST3A1Q9Y663 406 aa11.34□□□□□ -0.59
SF3B6-201ENST00000233468 PLXNB3Q9ULL4 1909 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 IGLON5A6NGN9 336 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 C10orf142B7Z368 130 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 RNF103O00237 685 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 TOR1BO14657 336 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 FPGTO14772 594 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 VILLO15195 856 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 SLC31A1O15431 190 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 HYAL3O43820 417 aaPredicted RBP11.33□□□□□ -0.6
SF3B6-201ENST00000233468 LZTS3O60299 673 aaPredicted RBP11.33□□□□□ -0.6
SF3B6-201ENST00000233468 ANXA9O76027 345 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 CER1O95813 267 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 ELFN1P0C7U0 828 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 STIP1P31948 543 aaKnown RBP11.33□□□□□ -0.6
SF3B6-201ENST00000233468 ACTN2P35609 894 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 CD86P42081 329 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 DSC2Q02487 901 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 KLF1Q13351 362 aaPredicted RBP11.33□□□□□ -0.6
SF3B6-201ENST00000233468 ARHGEF7Q14155 803 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 DPPA4Q7L190 304 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 DCP2Q8IU60 420 aaKnown RBP11.33□□□□□ -0.6
SF3B6-201ENST00000233468 REXO1L1PQ8IX06 675 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 OXR1Q8N573 874 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.33□□□□□ -0.6
SF3B6-201ENST00000233468 CNTD1Q8N815 330 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 KDF1Q8NAX2 398 aaPredicted RBP11.33□□□□□ -0.6
SF3B6-201ENST00000233468 C1orf216Q8TAB5 229 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 ARRDC2Q8TBH0 407 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 LRRN4Q8WUT4 740 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 SCRN2Q96FV2 425 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 IMP4Q96G21 291 aaKnown RBP11.33□□□□□ -0.6
SF3B6-201ENST00000233468 PBKQ96KB5 322 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 C1QTNF2Q9BXJ5 285 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 TDRD1Q9BXT4 1180 aaKnown RBP11.33□□□□□ -0.6
SF3B6-201ENST00000233468 PCDH9Q9HC56 1237 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 FAM153AQ9UHL3 310 aa11.33□□□□□ -0.6
SF3B6-201ENST00000233468 ATRXP46100 2492 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 TTC24A2A3L6 582 aaPredicted RBP11.32□□□□□ -0.6
SF3B6-201ENST00000233468 PSMD11O00231 422 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 YKT6O15498 198 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 KCNN4O15554 427 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 CEP104O60308 925 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 MMP20O60882 483 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 OPHN1O60890 802 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 PAK4O96013 591 aaPredicted RBP11.32□□□□□ -0.6
SF3B6-201ENST00000233468 ZNF30P17039 623 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 RBL1P28749 1068 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 VIPR1P32241 457 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 MMP12P39900 470 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 CSNK1EP49674 416 aaKnown RBP11.32□□□□□ -0.6
SF3B6-201ENST00000233468 LIG3P49916 1009 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 SKOR1P84550 965 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 CDK18Q07002 472 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 NIPAL4Q0D2K0 466 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 WASHC5Q12768 1159 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 TRAF2Q12933 501 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 SEL1L3Q68CR1 1132 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 AADACL2Q6P093 401 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 PIP4P1Q86T03 277 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 RAVER1Q8IY67 606 aaKnown RBP11.32□□□□□ -0.6
SF3B6-201ENST00000233468 VOPP1Q96AW1 172 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 KLHDC7BQ96G42 594 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 SLC6A18Q96N87 628 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 FCRL5Q96RD9 977 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 GTPBP2Q9BX10 602 aaKnown RBP11.32□□□□□ -0.6
SF3B6-201ENST00000233468 TLR10Q9BXR5 811 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 GDF3Q9NR23 364 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 RSPH14Q9UHP6 348 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 KLK13Q9UKR3 277 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 ZFR2Q9UPR6 939 aaKnown RBP11.32□□□□□ -0.6
SF3B6-201ENST00000233468 ANKRD6Q9Y2G4 727 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 AAR2Q9Y312 384 aaKnown RBP11.32□□□□□ -0.6
SF3B6-201ENST00000233468 PPIL1Q9Y3C6 166 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 LOC400499M0QZD8 3231 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 KNL1Q8NG31 2342 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 NUMA1Q14980 2115 aa11.32□□□□□ -0.6
SF3B6-201ENST00000233468 ANKRD11Q6UB99 2663 aaPredicted RBP11.32□□□□□ -0.6
SF3B6-201ENST00000233468 BPTFQ12830 3046 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 PTPRBP23467 1997 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 A0A0J9YYE9 177 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 SRRM3A6NNA2 597 aaPredicted RBP11.31□□□□□ -0.6
SF3B6-201ENST00000233468 A6NNZ2 444 aa11.31□□□□□ -0.6
SF3B6-201ENST00000233468 TLR4O00206 839 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms