RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 KCTD13Q8WZ19 329 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 DPF3Q92784 378 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 HDAC11Q96DB2 347 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 SIK2Q9H0K1 926 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 CCDC68Q9H2F9 335 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 CYP4F12Q9HCS2 524 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 VTA1Q9NP79 307 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 CNGB3Q9NQW8 809 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 V9GYQ6 96 aa9.45□□□□□ -0.9
HLA-DOA-201ENST00000229829 FAM155AB1AL88 458 aaPredicted RBP9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 BTBD19C9JJ37 291 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 PLOD2O00469 737 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 PTGESO14684 152 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 ACOT8O14734 319 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 CHEK2O96017 543 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 MT-CO1P00395 513 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 PABPC1P11940 636 aaKnown RBP9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 BMXP51813 675 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 PPP1R3AQ16821 1122 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 NOMO2Q5JPE7 1267 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 PDZD4Q76G19 769 aaPredicted RBP9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 RNF135Q8IUD6 432 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 SLC15A4Q8N697 577 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 SMG8Q8ND04 991 aaKnown RBP9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 BPIFB6Q8NFQ5 453 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 LRTOMTQ8WZ04 291 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 EMID1Q96A84 441 aaPredicted RBP9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 CDCA5Q96FF9 252 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 PCED1BQ96HM7 432 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 OSBPL2Q9H1P3 480 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 WDCPQ9H6R7 721 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 ITGB1BP2Q9UKP3 347 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 RAB26Q9ULW5 256 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 ACOT9Q9Y305 439 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 IPPQ9Y573 584 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 TTC3P53804 2025 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 MYLKQ15746 1914 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 PDCD11Q14690 1871 aaKnown RBP9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 MAGEB16A2A368 324 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 FAM149AA5PLN7 773 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 DFFAO00273 331 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 SDHDO14521 159 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 DYNC1LI2O43237 492 aaPredicted RBP9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 H6PDO95479 791 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 SMIM10L2AP0DMW4 78 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 SMIM10L2BP0DMW5 78 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 ZNF23P17027 643 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 WARSP23381 471 aaKnown RBP9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 PLK1P53350 603 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 TAS2R39P59534 338 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 PFKPQ01813 784 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 SLC12A1Q13621 1099 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 SNX17Q15036 470 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 ZNF789Q5FWF6 425 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 RWDD4Q6NW29 188 aaKnown RBP9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 TAS2R42Q7RTR8 314 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 CATSPER1Q8NEC5 780 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 NTAN1Q96AB6 310 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 KIFC1Q9BW19 673 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 NOL11Q9H8H0 719 aaKnown RBP9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 EFCAB1Q9HAE3 211 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 CHST12Q9NRB3 414 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 DDX28Q9NUL7 540 aaKnown RBP9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 GTSE1Q9NYZ3 720 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 GMPR2Q9P2T1 348 aaKnown RBP9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 MTF2Q9Y483 593 aaPredicted RBP9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 PRSS51A0A1B0GVH4 220 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 FAM95CA0A1B0GW59 222 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 TREHO43280 583 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 IDO1P14902 403 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 EPHX2P34913 555 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 CHRNA4P43681 627 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 RALGDSQ12967 914 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 PPIL2Q13356 520 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 ADRM1Q16186 407 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 DGKDQ16760 1214 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 TMEM102Q8N9M5 508 aaPredicted RBP9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 HEXDCQ8WVB3 486 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 TSNARE1Q96NA8 513 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 SLC9A7Q96T83 725 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 NDFIP2Q9NV92 336 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 TRHDEQ9UKU6 1024 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 RABL2BQ9UNT1 228 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 CORINQ9Y5Q5 1042 aa9.44□□□□□ -0.9
HLA-DOA-201ENST00000229829 C7orf72A4D263 438 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 KRBA1A5PL33 1030 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 ERI2A8K979 691 aaKnown RBP9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 E7ENX8 843 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 TAF4O00268 1085 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 TNPO2O14787 897 aaKnown RBP9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 H2AFYO75367 372 aaKnown RBP9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 BCAS2O75934 225 aaPredicted RBP9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 MYO1DO94832 1006 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 BCL10O95999 233 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 KCNE1P15382 129 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 TSPAN8P19075 237 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 PNPLA4P41247 253 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 SLC1A2P43004 574 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 NR4A2P43354 598 aa9.43□□□□□ -0.9
HLA-DOA-201ENST00000229829 GSSP48637 474 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms