RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 SEPT4O43236 478 aa17.55■□□□□ 0.4
PRPF19-201ENST00000227524 ADAMTS4O75173 837 aa17.55■□□□□ 0.4
PRPF19-201ENST00000227524 STAMBPO95630 424 aa17.55■□□□□ 0.4
PRPF19-201ENST00000227524 LTA4HP09960 611 aaKnown RBP17.55■□□□□ 0.4
PRPF19-201ENST00000227524 YWHAQP27348 245 aa17.55■□□□□ 0.4
PRPF19-201ENST00000227524 ATP4BP51164 291 aa17.55■□□□□ 0.4
PRPF19-201ENST00000227524 CRYBB1P53674 252 aaPredicted RBP17.55■□□□□ 0.4
PRPF19-201ENST00000227524 NKX3-2P78367 333 aa17.55■□□□□ 0.4
PRPF19-201ENST00000227524 ZNF789Q5FWF6 425 aa17.55■□□□□ 0.4
PRPF19-201ENST00000227524 NEPROQ6NW34 567 aa17.55■□□□□ 0.4
PRPF19-201ENST00000227524 ERMP1Q7Z2K6 904 aa17.55■□□□□ 0.4
PRPF19-201ENST00000227524 FAM47BQ8NA70 645 aa17.55■□□□□ 0.4
PRPF19-201ENST00000227524 ITFG2Q969R8 447 aa17.55■□□□□ 0.4
PRPF19-201ENST00000227524 PHF21BQ96EK2 531 aa17.55■□□□□ 0.4
PRPF19-201ENST00000227524 TCF12Q99081 682 aa17.55■□□□□ 0.4
PRPF19-201ENST00000227524 MTG1Q9BT17 334 aaPredicted RBP17.55■□□□□ 0.4
PRPF19-201ENST00000227524 RHOBTB2Q9BYZ6 727 aa17.55■□□□□ 0.4
PRPF19-201ENST00000227524 GSTO2Q9H4Y5 243 aa17.55■□□□□ 0.4
PRPF19-201ENST00000227524 ENTPD7Q9NQZ7 604 aa17.55■□□□□ 0.4
PRPF19-201ENST00000227524 TRAF6Q9Y4K3 522 aa17.55■□□□□ 0.4
PRPF19-201ENST00000227524 PTGESO14684 152 aa17.54■□□□□ 0.4
PRPF19-201ENST00000227524 AKAP10O43572 662 aa17.54■□□□□ 0.4
PRPF19-201ENST00000227524 PMPCBO75439 489 aa17.54■□□□□ 0.4
PRPF19-201ENST00000227524 FAM163BP0C2L3 166 aa17.54■□□□□ 0.4
PRPF19-201ENST00000227524 HSPA8P11142 646 aaKnown RBP17.54■□□□□ 0.4
PRPF19-201ENST00000227524 GRIA3P42263 894 aa17.54■□□□□ 0.4
PRPF19-201ENST00000227524 GALNT1Q10472 559 aaPredicted RBP17.54■□□□□ 0.4
PRPF19-201ENST00000227524 PITRM1Q5JRX3 1037 aa17.54■□□□□ 0.4
PRPF19-201ENST00000227524 CYHR1Q6ZMK1 362 aa17.54■□□□□ 0.4
PRPF19-201ENST00000227524 KIAA0408Q6ZU52 694 aa17.54■□□□□ 0.4
PRPF19-201ENST00000227524 SMG8Q8ND04 991 aaKnown RBP17.54■□□□□ 0.4
PRPF19-201ENST00000227524 CANT1Q8WVQ1 401 aa17.54■□□□□ 0.4
PRPF19-201ENST00000227524 TFAP2CQ92754 450 aa17.54■□□□□ 0.4
PRPF19-201ENST00000227524 RNF34Q969K3 372 aa17.54■□□□□ 0.4
PRPF19-201ENST00000227524 FSD1LQ9BXM9 530 aa17.54■□□□□ 0.4
PRPF19-201ENST00000227524 CACNG4Q9UBN1 327 aa17.54■□□□□ 0.4
PRPF19-201ENST00000227524 MTF2Q9Y483 593 aaPredicted RBP17.54■□□□□ 0.4
PRPF19-201ENST00000227524 HEMK1Q9Y5R4 338 aaPredicted RBP17.54■□□□□ 0.4
PRPF19-201ENST00000227524 CROCCQ5TZA2 2017 aa17.54■□□□□ 0.4
PRPF19-201ENST00000227524 UBFD1O14562 309 aaKnown RBP17.53■□□□□ 0.4
PRPF19-201ENST00000227524 MAFKO60675 156 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 MT-CO1P00395 513 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 HLA-DQB2P05538 268 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 RBP1P09455 135 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 NOGQ13253 232 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 MAP7D1Q3KQU3 841 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 CLEC6AQ6EIG7 209 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 GDF6Q6KF10 455 aaPredicted RBP17.53■□□□□ 0.4
PRPF19-201ENST00000227524 DHRS4L2Q6PKH6 230 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 LARP4Q71RC2 724 aaKnown RBP eCLIP17.53■□□□□ 0.44e-9■■■■□ 22.5
PRPF19-201ENST00000227524 ROPN1LQ96C74 230 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 SENP8Q96LD8 212 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 FBRSL1Q9HCM7 1045 aaKnown RBP17.53■□□□□ 0.4
PRPF19-201ENST00000227524 RNF186Q9NXI6 227 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 SAC3D1A6NKF1 404 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 MATN3O15232 486 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 KPNA6O60684 536 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 CCND3P30281 292 aaPredicted RBP17.53■□□□□ 0.4
PRPF19-201ENST00000227524 ACADVLP49748 655 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 CLCN5P51795 746 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 PRAMEP78395 509 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 KCTD21Q4G0X4 260 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 KDELC2Q7Z4H8 507 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 SLC22A9Q8IVM8 553 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 FUNDC1Q8IVP5 155 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 MRGPRX2Q96LB1 330 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 PRKD2Q9BZL6 878 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 ATXN3LQ9H3M9 355 aa17.53■□□□□ 0.4
PRPF19-201ENST00000227524 TRIM64CA6NLI5 447 aa17.52■□□□□ 0.4
PRPF19-201ENST00000227524 GPX3P22352 226 aa17.52■□□□□ 0.4
PRPF19-201ENST00000227524 STX1BP61266 288 aa17.52■□□□□ 0.4
PRPF19-201ENST00000227524 PLOD1Q02809 727 aaPredicted RBP17.52■□□□□ 0.4
PRPF19-201ENST00000227524 TMED1Q13445 227 aa17.52■□□□□ 0.4
PRPF19-201ENST00000227524 TAF2Q6P1X5 1199 aa17.52■□□□□ 0.4
PRPF19-201ENST00000227524 RETREG3Q86VR2 466 aa17.52■□□□□ 0.4
PRPF19-201ENST00000227524 PACRGLQ8N7B6 248 aa17.52■□□□□ 0.4
PRPF19-201ENST00000227524 MFSD2AQ8NA29 543 aa17.52■□□□□ 0.4
PRPF19-201ENST00000227524 ZUFSPQ96AP4 578 aa17.52■□□□□ 0.4
PRPF19-201ENST00000227524 PPP1R10Q96QC0 940 aaKnown RBP17.52■□□□□ 0.4
PRPF19-201ENST00000227524 SIK2Q9H0K1 926 aa17.52■□□□□ 0.4
PRPF19-201ENST00000227524 TUBA8Q9NY65 449 aaPredicted RBP17.52■□□□□ 0.4
PRPF19-201ENST00000227524 ATP6AP2A0A1C7CYW4 349 aa17.52■□□□□ 0.39
PRPF19-201ENST00000227524 ATP6AP2O75787 350 aa17.52■□□□□ 0.39
PRPF19-201ENST00000227524 ALDOCP09972 364 aaKnown RBP17.52■□□□□ 0.39
PRPF19-201ENST00000227524 ELNP15502 786 aa17.52■□□□□ 0.39
PRPF19-201ENST00000227524 RPL10P27635 214 aaKnown RBP17.52■□□□□ 0.39
PRPF19-201ENST00000227524 ACAP2Q15057 778 aa17.52■□□□□ 0.39
PRPF19-201ENST00000227524 SLC14A2Q15849 920 aa17.52■□□□□ 0.39
PRPF19-201ENST00000227524 NOMO2Q5JPE7 1267 aa17.52■□□□□ 0.39
PRPF19-201ENST00000227524 RANBP10Q6VN20 620 aa17.52■□□□□ 0.39
PRPF19-201ENST00000227524 GPR141Q7Z602 305 aa17.52■□□□□ 0.39
PRPF19-201ENST00000227524 DQX1Q8TE96 717 aaKnown RBP17.52■□□□□ 0.39
PRPF19-201ENST00000227524 ANKRD49Q8WVL7 239 aa17.52■□□□□ 0.39
PRPF19-201ENST00000227524 TSPAN17Q96FV3 270 aa17.52■□□□□ 0.39
PRPF19-201ENST00000227524 PPP1R2P1Q96PQ5 205 aa17.52■□□□□ 0.39
PRPF19-201ENST00000227524 GPATCH1Q9BRR8 931 aaKnown RBP17.52■□□□□ 0.39
PRPF19-201ENST00000227524 TRMOQ9BU70 441 aa17.52■□□□□ 0.39
PRPF19-201ENST00000227524 SLC39A8Q9C0K1 460 aa17.52■□□□□ 0.39
PRPF19-201ENST00000227524 CCM2LQ9NUG4 571 aaPredicted RBP17.52■□□□□ 0.39
PRPF19-201ENST00000227524 SMOXQ9NWM0 555 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms